Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03846 ATGGATTCTGGTAATAGTAGTATGCAATCTTCCAGTGGTGGTGATGAAGAGTATGATTCACGCGCTGAATCAATCTCTGTGTTCTTAAACAATAACCCACCTCCTCCACCACCACCACCACCTTTCACTACCACTGCTTGTAATAACAACCATTTGATTTTTAGCACCCCACAACACCAACATACCCATATGTTTGACCCTTTATCCAATTACATGGATCCAATACAAAAATCTCCATCACACCCCAACACAAACTCACTTCTAAACCTTGACATGGTTTGGTCCAAAGTTTCTAGATCCGAACCAAACCAAGCCGATCTTGGTGGCTTGATAATACCTTGTTCATCTTCCCAGCAGAACCAAGCTTTTCTCTTAAGTCAATTGGCGGGTCAAACAAGAGGTGTTGGTGCTATTCCAACCACACACTATTCTCTACCTCAAGAAAGTGGTTCACTTTCGGTTTCAGCAGCCGCCAATGATCAAGCTCATGGCAACAACAACAACAACATGGTTCGAAATCCTAAGAAAAGGTCAAGAGCTTCTAGGCGTGCACCAACTACTGTGCTCACTACGGACACCACAAATTTCAGAGCCATGGTTCAGGAATTTACTGGTATCCCAGCACCACCCGTCACATCTTCACATTTCCCAAGAACAAGGTTGGATCTCTTTGGTTCTGCTGCTACTTCAGCTGTAAGATCCGTGTCATCCACTGGTTTAGACCCTCCACCACCACCTTATCTTCTTCGCCCTTTTGCACAGAAAGTTCAACCTCCTACTCACTCCTTTACTCCCTCCACTTCTTCAATTCCACCCTCAGTATCTAATGATTCAACTAACAACTCTCCTAATAATTCAACCTCCATTAACTACCAGTTATCATCATCTCATTTAGGCCTTCTAAAGCAGCCGCAGCAGCCTCTAAACATGCAAAACCCAATTCTCAGCTTCCAATCCATTCTCCAAGCACCCCAAAAGTACCCACTTGGGAATTCTTCTTTTCTTGCCTCTAAAACTCAACAACCCACCTTGGAAATCCCACCCACTGTTGATTCACATCTGAAGATGGGTGTGATGGATGCATTAGGATTGAGCCATGCGCATGTTAACACCAACGTAGGTGGTCTTCATCAGAACATGATTCATTCATCATCCGATGGAGCACTGTCGAGGGTCAACAACAACATGTGCAATCCTTCAGATTGGATACAAACACAAAGAACGGGTACCATTACCAACAATGATGGTGATCATGGAGGAGTTCTGAGGTCTCTAAGTGGCACTGTTGTTAACTACACAAGTAATATTCCAGCAGAGAGAGTATCAAACGGCAAAGTAAACTACTCAGCTTCTTCATCGGATTTTCATGGAGAGAAGGGACCAGAATGTGCAGTGGCTGCAAGAAATGAAGGTACGGTGGAGTCATGGATTAATTGTTCTTCTGATTAA 1449 0.4382 MDSGNSSMQSSSGGDEEYDSRAESISVFLNNNPPPPPPPPPFTTTACNNNHLIFSTPQHQHTHMFDPLSNYMDPIQKSPSHPNTNSLLNLDMVWSKVSRSEPNQADLGGLIIPCSSSQQNQAFLLSQLAGQTRGVGAIPTTHYSLPQESGSLSVSAAANDQAHGNNNNNMVRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPVTSSHFPRTRLDLFGSAATSAVRSVSSTGLDPPPPPYLLRPFAQKVQPPTHSFTPSTSSIPPSVSNDSTNNSPNNSTSINYQLSSSHLGLLKQPQQPLNMQNPILSFQSILQAPQKYPLGNSSFLASKTQQPTLEIPPTVDSHLKMGVMDALGLSHAHVNTNVGGLHQNMIHSSSDGALSRVNNNMCNPSDWIQTQRTGTITNNDGDHGGVLRSLSGTVVNYTSNIPAERVSNGKVNYSASSSDFHGEKGPECAVAARNEGTVESWINCSSD* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03846 482 MobiDBLite consensus disorder prediction 1 15 - -
Rops11g03846 482 MobiDBLite consensus disorder prediction 160 174 - -
Rops11g03846 482 MobiDBLite consensus disorder prediction 160 186 - -
Rops11g03846 482 MobiDBLite consensus disorder prediction 257 288 - -
Rops11g03846 482 MobiDBLite consensus disorder prediction 1 41 - -
Rops11g03846 482 MobiDBLite consensus disorder prediction 234 288 - -
Rops11g03846 482 Pfam VQ motif 183 210 IPR008889 -
Rops11g03846 482 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 359 IPR039609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03846 Rops-Chr11 72276067 72278534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03846 - - pcin:129319321 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03846 11 72276067 72278534 Rops11g03846 11 72276067 72278534 ECH