Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03841 ATGGGAAAGAAACAATCTTTGCGTAGCAAAGCCACCCACTTTGTATCTGTCCTTCTTAACCCCATCTCTGATTCTGACACTAACAATCACAAACCCTCCAAACACCCTTCACCTCCACCTCCTTCTGAAGAAGTAGGTGAATTGAAAATAAGTGCATCAGAGACAACTGATGAAGAGGGTAGCCATGATTTAGTTGACGATGGACCTGATACTTCATCCTTCACTGCATTCCTTTATTCTTTAATGTCTTCCTCAGCCTCTGGAGATCAAGCAAACCCAAATGGGCAGAATGATGATAAAGTTGCACCTGATAATAACCCTTTACCAGACTCATCAATGAAGGAAAATGGTGGGAGGAAAAGTTTGTTTTCTAAAAGTAAACAATCACTTGGTAGAGCTATTCGCCAAGCTGCTAGAATAGGTGGATTTCGCCATCAAGATCGAAAGGATAATCTTGAAATGAAATTTGATGATGGGCATGGTTCTAGAATTTCTGGTGTTGAGCCTGTGAAAGAGTCAGAGCCGGTGCCTTTGTTTGATCTGCCAGAAATTTCTGAACCTTCAGTTCTTCTTTCAGATAGTATAAGAAATACTCTTTATGCTTCTCTTCCACCTCTTATGCATGGAAGGAAATGGCTGTTGCTATACAGCACTTGGAGGAATGGTATATCCCTTTCAACTCTTTACCGGAGAAGCATGCTTTGGCCTGGATTGAGTTTGCTGGTTGTTGGAGACCGAAAAGGAGCTGTGTTTGGCAGCTTGGTTGAAGCACCTCTGAGACCATCCAACAAGAGAAAATACCAGGGAACAAACAATACATATGTTTTCTCAAATATCTCTGGTCATCCTGTTATATATCGTCCAACAGGGGTTAACCGCTATTTCACACTTTGTAACACTGACTACATAGCTATTGGTGGCGGAGGTCATTTTGCACTTTATTTGGATGGTGATCTATTGAATGGCTCGAGTTCGGTCTCAGAAACTTATGGGAATCCTTGCCTTGCAAATTCTCAAGACTTTGAAGTGAAAGAAGTAGAGTTGTGGGGGTTTGTACATACTTCAAAATATGAGGAAGTACTCGCATTGAGCAGAACAGAGGTACCTGGGATCTGTCGATGGTAA 1125 0.4178 MGKKQSLRSKATHFVSVLLNPISDSDTNNHKPSKHPSPPPPSEEVGELKISASETTDEEGSHDLVDDGPDTSSFTAFLYSLMSSSASGDQANPNGQNDDKVAPDNNPLPDSSMKENGGRKSLFSKSKQSLGRAIRQAARIGGFRHQDRKDNLEMKFDDGHGSRISGVEPVKESEPVPLFDLPEISEPSVLLSDSIRNTLYASLPPLMHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLVVGDRKGAVFGSLVEAPLRPSNKRKYQGTNNTYVFSNISGHPVIYRPTGVNRYFTLCNTDYIAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLANSQDFEVKEVELWGFVHTSKYEEVLALSRTEVPGICRW* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03841 374 SMART 109ultra 188 352 IPR006571 -
Rops11g03841 374 MobiDBLite consensus disorder prediction 85 101 - -
Rops11g03841 374 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 20 355 - -
Rops11g03841 374 MobiDBLite consensus disorder prediction 1 70 - -
Rops11g03841 374 MobiDBLite consensus disorder prediction 109 128 - -
Rops11g03841 374 ProSiteProfiles TLDc domain profile. 189 352 IPR006571 -
Rops11g03841 374 Pfam TLD 214 351 IPR006571 -
Rops11g03841 374 MobiDBLite consensus disorder prediction 9 27 - -
Rops11g03841 374 MobiDBLite consensus disorder prediction 85 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03841 Rops-Chr11 72179414 72182224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03841 211 360 EF-hand Containing Proteins AT5G06260 27.500 8.87e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03841 - - gmx:100804124 576.63