Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03814 ATGACATCTTCAGTGGTTGAGGACGAGAGAAAACATGAGCCCTCGGATTTGGTCATGAATCCAACGGTTGGAAATCTTTCACTTCCTAATGAAACATTCTTGAGAGCTGCAATTTCACTCAAGGACAAGGTTGTGGAGGTAACTTGGGATCGGAGAGAAATGGTTGACCCGACAGTGTACACGGGTTTGTTGGGCACAGCTTTCACTTGCTTGAGATCGTACGAGGTTACCGGTAACCAGAAGGGCTTGCTACTATGCTCGGAGATCATCGACACGTGTGCCACCGTTGCACGTGCCTCCCTCAGGCACGTGACTTTTTTGTGTGGTAGAGGAGGCGTATATGCACTTGGTGCTGTCGCAGCTAATTACATGGGGGACCTTCGAAAGCGTGACCTGTTTTTGGATCAATTCGTTGAGGTGGCAAAAGAAAGAGCCCTACCAGTTGGACCTGAGGAAGGTGGTTTCGGAATGTCATATGATCTTCTGTATGGGCGAGCTGGATTCTTATGGGGTGCATTATTCTTAAACAAGTACCTAGGAGAAGATGCAATGCCCAAAGATATTCTGATGCCTATTATTGATGCTGTATTGGCTGGGGGTAGAGCAGGAGCATCTGATATTAAAGACTGTCCATTGATGTATAGATGGCATGGGACTAGGTACCTTGGTGCAGCAAATGGCCTTGCTGGTATCCTACATGTGCTCCTTCATTTCCCACTTCCTGTTGAGGATGCTGAAGATGTCAAGGGAACTTTGAGGTACCTAATGAGCAAACGCTTCCCTCATAGTGGAAACTACCCCTCTAGTGAAGGGAATCCAAGGGATAAGTTAGTGCAGTGGGGTCATGGAGCAACTGGCATGGCCATCACATTGTCCAAAGCAGCACAGGTTTTTCCAAATGACAGAGAACTACGAGATGCGGCAATAGAAGCAGGGGAAGTTGTGTGGAAGAGTGGATTGGTGAAGAATGTGGGACTTGCTGATGGTGTATCTGGAAATGCCTACGCCTTCCTCTCTCTCTACAGACTAACTAAAGAGAGTATATATGAAGATAGAGCAAAATCATTCTCTTGCTTCTTGTATGATAATGTGAGAACTCTAGCTACTGAGGGGGGAGCACATAAAGGTGGCAATGGATACTCTCTTTTCCATGGACTTGCTGGGACAGCATGTCTCTGGTTTGATCTGCTTGCACCAGACAACTCTAGGTTTCCAGGCTATGAATTATAG 1230 0.4667 MTSSVVEDERKHEPSDLVMNPTVGNLSLPNETFLRAAISLKDKVVEVTWDRREMVDPTVYTGLLGTAFTCLRSYEVTGNQKGLLLCSEIIDTCATVARASLRHVTFLCGRGGVYALGAVAANYMGDLRKRDLFLDQFVEVAKERALPVGPEEGGFGMSYDLLYGRAGFLWGALFLNKYLGEDAMPKDILMPIIDAVLAGGRAGASDIKDCPLMYRWHGTRYLGAANGLAGILHVLLHFPLPVEDAEDVKGTLRYLMSKRFPHSGNYPSSEGNPRDKLVQWGHGATGMAITLSKAAQVFPNDRELRDAAIEAGEVVWKSGLVKNVGLADGVSGNAYAFLSLYRLTKESIYEDRAKSFSCFLYDNVRTLATEGGAHKGGNGYSLFHGLAGTACLWFDLLAPDNSRFPGYEL* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03814 409 PRINTS Eukaryotic LanC-like protein family signature 295 316 IPR020464 -
Rops11g03814 409 PRINTS Eukaryotic LanC-like protein family signature 257 272 IPR020464 -
Rops11g03814 409 PRINTS Eukaryotic LanC-like protein family signature 395 409 IPR020464 -
Rops11g03814 409 PRINTS Eukaryotic LanC-like protein family signature 189 204 IPR020464 -
Rops11g03814 409 PANTHER LANC-LIKE PROTEIN 30 409 - -
Rops11g03814 409 SMART LANC_like_2 53 409 IPR007822 GO:0031179
Rops11g03814 409 SUPERFAMILY LanC-like 40 409 - -
Rops11g03814 409 Gene3D - 21 409 IPR012341 GO:0005975
Rops11g03814 409 MobiDBLite consensus disorder prediction 1 16 - -
Rops11g03814 409 CDD euk_LANCL 59 405 - -
Rops11g03814 409 MobiDBLite consensus disorder prediction 1 23 - -
Rops11g03814 409 Pfam Lanthionine synthetase C-like protein 54 409 IPR007822 GO:0031179
Rops11g03814 409 PRINTS LanC-like protein superfamily signature 277 297 IPR007822 GO:0031179
Rops11g03814 409 PRINTS LanC-like protein superfamily signature 56 74 IPR007822 GO:0031179
Rops11g03814 409 PRINTS LanC-like protein superfamily signature 221 237 IPR007822 GO:0031179
Rops11g03814 409 PRINTS LanC-like protein superfamily signature 159 174 IPR007822 GO:0031179
Rops11g03814 409 PRINTS LanC-like protein superfamily signature 324 337 IPR007822 GO:0031179
Rops11g03814 409 PRINTS LanC-like protein superfamily signature 379 396 IPR007822 GO:0031179
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03814 Rops-Chr11 71892097 71896139 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03814 - - aprc:113849930 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03814 11 71892097 71896139 Rops11g03814 11 71892097 71896139 ECH