Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03806 ATGCTTTTGAAGTCTGCATTCTTGATGGGACTTGTTTTTACCAAATGGGAATGTGCATTCTTACTGTGTTGTTGTCTCATCACTTCTAGAGTATATTCAGTGGAGGGGTTACATAAGGATTCTAAAGTGAGAGGAGTGAACTTAGGAGGCTGGCTGGTTATTGAAGGTTGGATCAAGCCTTCATTGTTTGATGGCATTGCCAATGGAGACATGCTTGATGGGACACAGGTACAGTTTAAGTCAGTGACATTGCAGAAGTATGTATCTGCAGAGAATGGAGGAGGAATGAATGTGACAGTTGACAGAGATGTTCCATCTTCTTGGGAAACCTTCAGGTTATGGAGAGTATCTGAATCAGAATTTCAATTGCGTACCTCCCAAGGCCAATTTCTTACATGTGATGGCGGAGGCTGCACTGTCTCTGCAACAGCAAAATCAGCTTCAACATCAGAGACTTATGAAATTGAGCGGAATGAGAAAAATAGGATTCACTTCAAGATAAAGAATGGAGCATATCTGCAGGCCACAACAGGTGGTCAGCTTACAGCAGACTATCCAGGCACACCAGGATGGGATGACAATGCTGCCACGTTTGAAATAACAATTGTAGCAAATGACTTGCATGGAGATTACCAACTAGCAAATGGATATGGGCATGATCGTGCAAAAGAGGTTTATAGGAGACATAGAAATAGCTTTATCACCACAGAGGATTTCAGATTTCTATATAAACATGGTATAAATACTGTGAGGATACCAGTTGGGTGGTGGATTGCTTATGATCCTGATCCTCCGGGTCCATTTATTGGAGGAAGTCTTGAAGCTCTAGATAATGCATTTTCATGGGCACTAGAATATGATATAAAATGCATAATTGACCTTCATGCTGCTCCTGGTTCCCAAAATGGAATGGAACATAGTGCAAGCAGAGATGGATTTACAGGCTGGCCGACCTCTCCAGATTACATTTCAGATTCATTGCATGTTGTTGAATTTTTAGTTTCTAGATATGCAAAGCATCCTGCATTGCTGGGAATTGAGCTTTTGAATGAACCATCTACTGCCACAGTTTCATTTGATATTTTAGTTTCATATTACAAGCAGGGCTACCAAATTGTTAGGAAGCACTCATCATCAGCTTATGTGATAATCTGCCAGAGAATTGGCATTGCAGATCCTTTGGAACTTTATCAAGCCAACATAGGATCTCACAACTTAGTTTTGGATTTGCATTTCTACAATCTCTTTGACTCATTTTTTGTTAATATGAGTGCTGGGGATAATATACAATACATATACAAAAGCCGGGAAGGTCTGTTGCAGGCCTTCAACAATTCAAATGGCCCACTTGTTTTTATTGGAGAGTGGGTGAATGAGTGGAATGTGACAAACGGATCCCAAAAAGATTATCAGGACTTTGGAAAGGCACAGTTAGATGTCTATAATGCAGCTTCCTTTGGATGGTGTTATTGGACACTAAAAAATGATAGGGAGCACTGGGATTTTGAATGGAACATTAGGAACAACTATCTTCAATTAGGTAACTCGCCCAGCAAACTGAACTTAAACACTTTAGGATTGCTAGGATTGGCATGCATCTGGTTTTGTCTTCTTCCCTTTTTGTGA 1626 0.4034 MLLKSAFLMGLVFTKWECAFLLCCCLITSRVYSVEGLHKDSKVRGVNLGGWLVIEGWIKPSLFDGIANGDMLDGTQVQFKSVTLQKYVSAENGGGMNVTVDRDVPSSWETFRLWRVSESEFQLRTSQGQFLTCDGGGCTVSATAKSASTSETYEIERNEKNRIHFKIKNGAYLQATTGGQLTADYPGTPGWDDNAATFEITIVANDLHGDYQLANGYGHDRAKEVYRRHRNSFITTEDFRFLYKHGINTVRIPVGWWIAYDPDPPGPFIGGSLEALDNAFSWALEYDIKCIIDLHAAPGSQNGMEHSASRDGFTGWPTSPDYISDSLHVVEFLVSRYAKHPALLGIELLNEPSTATVSFDILVSYYKQGYQIVRKHSSSAYVIICQRIGIADPLELYQANIGSHNLVLDLHFYNLFDSFFVNMSAGDNIQYIYKSREGLLQAFNNSNGPLVFIGEWVNEWNVTNGSQKDYQDFGKAQLDVYNAASFGWCYWTLKNDREHWDFEWNIRNNYLQLGNSPSKLNLNTLGLLGLACIWFCLLPFL* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03806 541 Pfam Cellulase (glycosyl hydrolase family 5) 232 496 IPR001547 GO:0004553|GO:0071704
Rops11g03806 541 Pfam Fascin domain 95 184 IPR022768 GO:0030674|GO:0051015
Rops11g03806 541 ProSitePatterns Glycosyl hydrolases family 5 signature. 344 353 IPR018087 GO:0004553|GO:0005975
Rops11g03806 541 Gene3D - 55 197 - -
Rops11g03806 541 SUPERFAMILY (Trans)glycosidases 42 512 IPR017853 -
Rops11g03806 541 SUPERFAMILY Actin-crosslinking proteins 75 193 IPR008999 -
Rops11g03806 541 PANTHER FASCIN 38 513 IPR010431 GO:0007015|GO:0051015
Rops11g03806 541 Gene3D Glycosidases 198 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03806 Rops-Chr11 71710310 71715002 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03806 - - gmx:100809472 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03806 11 71710310 71715002 Rops11g03806 11 71710310 71715002 ECH