Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03803 ATGAAACTGAAAGAGGTAATAGAGATAATGAAAGACCAAGCTTCACAATGCAAAGCTGCAATCCTTTCCAAACGTACCACTCTCTCTCTTCTTCGCGCCACCAGCCATGACTCTTTCACCCCTCCAACCCACAAACACATCTCAATCCTTCTTTCTTCCGGCGATGGTTCACGCTCCACCGCTTCCGCCGCCATAGAGCTTCTTATGGACCGTCTTCAAGCCACCCATAACTCCGCCGTGGCACTCAAGTGCCTCATCGCCGTCCACCACATCATCAAAAACGGAACCTTTATCCTCCGTGACCAGCTCTCTGTTTACCCCTACAGTGGTGGCAGAAACCACCTTAACCTCTCCAACTTCCGCGACAAAAGTAGCCCCATATCTTGGGAACTCTCTTCGTGGGTACGATGGTACGCTAAACATATAGAACAGCTTCTTAGTACTTCTAGAACCCTTGGCTTCTTCCTCGGAGTCTCCCAATCTTCAACGCTAGAAGAAAGAGTTTCGGGTCTTATGAACGGTGATCTTTTGAGAGAGACAGATTCTTTGTTGGTTCTTATTGAGGGAATTGTGAGGATACCCAATTCTACATCAACCGAAGGGAACAAGTTGGTGGTTGAGATAGTGCGGTTGGTGGAAGATGATGGGGTTGTGGCGCTGAGTGAGGTTTCCATCAGAGTGAACGAGTATAGGGAGAGGGAGAGACTTGGTTGTCTTGGTTTTGGAGAAGTGGTAGACTTGGTTTATGCTTTGAAGAGATTGGAGGAGTGTAAAGAGAGGGTGATGATGATGATGAAGATGATGAAGGTGGCACAGGAGTGGAGATTGTGGGATTCTGTTAGAGAATTGAAGGACAAGGTTGGGAAGATGGAGGTGTGTAAGGAAGAGGGGAAGCTATGCAAGAAGGTGGTGACAGGGGACAGGGGAACCGAGTCAGATCGATTTGCTGGCAGAGTTCCCAGTTCTGTTGATTGCATCAGGTTTCCCTCTGCAAGGTTCTTTTGGTAA 1008 0.4802 MKLKEVIEIMKDQASQCKAAILSKRTTLSLLRATSHDSFTPPTHKHISILLSSGDGSRSTASAAIELLMDRLQATHNSAVALKCLIAVHHIIKNGTFILRDQLSVYPYSGGRNHLNLSNFRDKSSPISWELSSWVRWYAKHIEQLLSTSRTLGFFLGVSQSSTLEERVSGLMNGDLLRETDSLLVLIEGIVRIPNSTSTEGNKLVVEIVRLVEDDGVVALSEVSIRVNEYRERERLGCLGFGEVVDLVYALKRLEECKERVMMMMKMMKVAQEWRLWDSVRELKDKVGKMEVCKEEGKLCKKVVTGDRGTESDRFAGRVPSSVDCIRFPSARFFW* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03803 335 SUPERFAMILY ENTH/VHS domain 28 154 IPR008942 -
Rops11g03803 335 ProSiteProfiles ENTH domain profile. 18 156 IPR013809 -
Rops11g03803 335 CDD ANTH_N_AP180_plant 28 149 - -
Rops11g03803 335 Gene3D - 1 155 IPR008942 -
Rops11g03803 335 SMART enth_2 24 156 IPR013809 -
Rops11g03803 335 Pfam ANTH domain 29 192 IPR011417 GO:0005543
Rops11g03803 335 FunFam Putative clathrin assembly protein At4g40080 2 155 - -
Rops11g03803 335 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 278 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03803 Rops-Chr11 71668364 71669371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03803 - K20043 gmx:100808393 394.815