Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03796 ATGAACGGTCTCGCTTCCGAATTCGGGTCTTTGTCGGAGCCCATCGATCGGGTCAAGAGGCTTTTGCATTACGCGTCTCTATTACCTTCGTTGGATCATTCGGACCGGGTTATGGAGAACCGGGTATCGGGTTGTGCAACCCAGGTTTGGGTGGTGGCCCACATGGACCAGGGTCTTAGGATGAGGTTTAGAGCCGACAGTGATTCGGAGATATCGAAGGGTTTTTGTTGGTGTTTGGTTTGGATGTTGGATGGTGCGGAACCTGAGGAGGTTCTCATGGTGGAGAAGGATGACTTGGCTGGTATCAATGTTGGGTTGAATGTTAAGGCATCTTCAAGGGTTAACACGTGGCACAATGTTTTCTTTGCCATGCAAAATGCTACTAAAGATTTGATCTTGCAGATGGAAGGAGAAGGAAACGCTTTTATTCATGATTTCCCCTCACAAACAAAGATACATCGGTGGTGA 468 0.4786 MNGLASEFGSLSEPIDRVKRLLHYASLLPSLDHSDRVMENRVSGCATQVWVVAHMDQGLRMRFRADSDSEISKGFCWCLVWMLDGAEPEEVLMVEKDDLAGINVGLNVKASSRVNTWHNVFFAMQNATKDLILQMEGEGNAFIHDFPSQTKIHRW* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03796 155 PANTHER SULFUR ACCEPTOR PROTEIN CSDE 4 140 IPR003808 -
Rops11g03796 155 Gene3D - 1 133 - -
Rops11g03796 155 SUPERFAMILY SufE/NifU 4 136 - -
Rops11g03796 155 Pfam Fe-S metabolism associated domain 6 126 IPR003808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03796 Rops-Chr11 71604168 71607429 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03796 - K03517 pcin:129309665 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03796 11 71604168 71607429 Rops11g03796 11 71604168 71607429 ECH