Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03793 ATGGCGGAGCTCCGTCACTCGTCGTCACTCGGCAGCCGAGCCACTTCTTCTCCGATGAAGCGCGACGTCGCCGGCGGTGGCGATTCTTCCCCTCTCATTCCTGACAACGACATCCCCGACGATCGCCACTCTCCCAAGGACCGCGACCGCTCTTATTTCCACTACCTTTGCTCCTTCTTCTCTGACGATCCTAGGGTTCCTCCTTACAACTCCAGGATCTCCCTATTCTTTACCTTACTTCTTCTTCTCGTTGCCTTACTCTCCATTTTCACCATTCTCCATAAATTGAATGCTCCTTACTTGTGTAACAAAGATGGGATTGTTCTTCACTGTCCACACGTTAAAGAATCGCCATCACTTTGGGAAAATCCTTACTCATCCACGACATCTTGGAAGCCTTGTGCTGAGCGCCGAGATGGTGTTATATCAGAACTTCCTCCTGAAAATGAAACAAGTGGCTATATATTCATCCATGCTGAAGGTGGTCTAAATCAGCAAAGAATTGCGATATGCAACGCAGTGGCTGTGGCAAAAATAATGAATGCCACTCTTATTTTGCCTGTATTGAAGCAGGACCAGATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGATGTGGATCACTTCATTGACTACCTAAAGGATGATGTCCGCATTGTCCGTGATATCCCAGAATGGTTTACTGATAAGTCAGAGCTATTTACTAGTATAAGACGAACTGTCAAAAACATTCCAAAATATGCACCTGCACAATTTTACATCGACAATGTTCTTCCCCGAATCAAGGAGAAGAAGATCATGGCTTTGAAACCTTTTGTTGATAGGCTAGGATATGACAATGTTCCTCCAGAAATCAACAAGTTGAGATGTAGGGTTAATTATCATGCTCTGAAATTTCTTCCTGATATAGAGCAGATGGCTGATTTACTAGCATCAAGGATGAGAAACCGGACAGGCGGTTCAAATCCTTACATGGCTTTACATCTTAGATTTGAAAAAGGAATGGTGGGCCTATCATTCTGTGATTTTGTGGGAACAAGAGAGGAAAAAGTTAAAATGGCAGAATATAGAAAAAAGGAGTGGCCTCGACGGTATAAGAATGGTTCCCACCTGTGGCAATTGGCTCTGCAGAAACGAAAGGAAGGACGATGTCCTCTAGAGCCTGGAGAAGTGGCTGTTATTCTTAGGGCTATGGGCTATCCGAAGGAAACTCAGATTTATGTAGCTTCTGGACAAGTGTATGGTGGACAGAATCGGATGGCTCCACTGAGGAACATGTTCCCTAATCTGGTTACAAAGGAGGAGTTGGCAACTAAAGAGGAGTTAGATGGTTTCAGAAAGCATGTCACGAGCCTTGCAGCTCTTGACTTCTTGGTATGCTTGAAATCAGATGTATTCGTGATGACCCATGGAGGCAACTTTGCTAAGCTTATCATTGGTGCCCGTAGATACATGGGTCACCGTCAAAAATCAATTAAGCCTGACAAAGGACTAATGTCCAAGTCTTTTGGGGATCCATACATGGGTTGGGCTACATTTGTAGAGGATGTTATTGTTACTCACCAGACACGGACGGGATTGCCAGAAGAGACTTTCCCTAACTATGACCTCTGGGAGAACCCTCTAACTCCTTGCATGTGCAGAGCCTGA 1653 0.4453 MAELRHSSSLGSRATSSPMKRDVAGGGDSSPLIPDNDIPDDRHSPKDRDRSYFHYLCSFFSDDPRVPPYNSRISLFFTLLLLLVALLSIFTILHKLNAPYLCNKDGIVLHCPHVKESPSLWENPYSSTTSWKPCAERRDGVISELPPENETSGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKDDVRIVRDIPEWFTDKSELFTSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIEQMADLLASRMRNRTGGSNPYMALHLRFEKGMVGLSFCDFVGTREEKVKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRQKSIKPDKGLMSKSFGDPYMGWATFVEDVIVTHQTRTGLPEETFPNYDLWENPLTPCMCRA* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03793 550 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 95 549 - -
Rops11g03793 550 Pfam GDP-fucose protein O-fucosyltransferase 154 486 IPR019378 -
Rops11g03793 550 PIRSF UCP009360 41 550 IPR024709 -
Rops11g03793 550 Gene3D - 296 494 - -
Rops11g03793 550 MobiDBLite consensus disorder prediction 1 46 - -
Rops11g03793 550 CDD O-FucT_plant 154 491 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03793 Rops-Chr11 71575949 71580846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03793 118 548 Miscellaneous Gene Families AT2G37980 36.384 4.62e-94 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03793 - - gmx:100809112 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03793 11 71575949 71580846 Rops11g03793 11 71575949 71580846 ECH