Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03786 ATGCAAGATGATATTCTTCTAAAGAAGCTCCTCCTTACACATGATCCAGATGGTCGTAGGCTGGATTCTGAGACAATGCTTCATGCTGTGGGCAACATTATGTTTCATGCTTCCACAATAGTAGGGGCTTCTAATTTATATTCTGCTTCCTTTCACAAGAATGATATAACTGAAATTGAAACGTTAGGTTGTTGTGAACCAATAGCATGCATCATCTCAAAACTATGCAAGATACTTTGCAAATGCTCTGGTGAAGGTGATATTAACTCGAGGATAATTAGTTTGTTTGATTTGATTGGGAAGTATAGCTGGGATGCAAAAGTAGTTTTAGTGCTTGCTGCCTTTGCTGCAAGATATGGTGAATTCTGGCTACTTATGCAGCTATATCCTGGTAATACTTTGGCGGCTTCAATTTCGAGTCTTAAGCAGCTACCCTGCAACTTAAGGCCACTGAAGCCACAAATTAAGGCATTGAGCTTGTTGGTTAAGATCATGATGGATGTGGCTATGTGTATCATTAAGTTTGAGTCACTGCCCCTTCAACATGTAGAGCTGGGCAATGATATGTGCCTTGTCACAAAGTCTCTTATATATGAAGCTGAATATTGGATCACCAGAAGCAGTTTGGCATGTTTTTCTCAAGTCATGGATTTCACAACCAAGAGACATGAGCAAGTGTATTCAGATTCAACAATAATTGCTGCTTGGGAGCTCTCAAGTTTAGCTTATAGGTTAAGTGACATATGCAACATTCTCAGAGGACAGGTGGATGTGTGTCACCGAGAAATAGAGAAAAACTTGTATGACATGCTGTTGAATCTTGTTCACGAGGAGCACATTGATAATCAGAAGGTTCTCAATTTATTTTTTCCTTCTAAGAATTACTTGCCATTGAAAGATTGCGCCACACAAGTAAAGCTTGGTGTGTCTGAACTGAAAAATAAGATAGTTTTGTTGTTGATATCAAAGCCGCAGCTACTCCCCATGGAACAATTATTCTTACTGGTTCAGCAAACATGTGAACATCCTTACAATGAGAGATTAAGGGACAGTTATAAGATTGTGTGGGTTCCCCTTCCATCTTCTGATACATGGACCGATGATGAAGAGAGTAGTTTTAATTTTCTATCAAATTCCTTGCCTTGGTATGCTGTTCAGAAACCAAGGTTACTTAGCTCAGCAGTGGTGAAGTACATTAGGGAACAATGGAACTACAAGGATGAGCCCATCATGGTAGCACTGGATTCAAATGGGAATGTCACAAATACCAATGCTCTTGATATGATCAAGATTTGGGGAGCCAGAGCTTATCCCTTTTCAACTTCAAAAGAGGCAGAGCTTTGGCAAAACCAAAATTTGACAATGCAACTTTTGCTGGCTGATATCAATCCTTTCATTGCTTACTGGGTTGAACAAGGCAGAAATATTTGCCTCTATGGGAGTGAAAACTTGGATTGGATCCAACAATTCAATGATAACATCACTGAGCTAAAACAAGCAGGTCTGCAGCTGGAAACAATATATGTAGGTAATAGTAGGTTAGGTGAACATGTTAAAAAAATAATGACAAGAACTGGTGAAATGAATCTTAGTGATCCACTTTCCTTCACAAAAGTACAATTCTTTTGGCTTCGGTTGGAGAGTATGAGGAGGTCTAAACTTCAACTAGGGAGGGTACCAAGTTCTGATCATGTCCTAGCTGAGTTGTCAGCTTTGCTTGACATGGATGATAAAGAGGAAGGTTGGGCAGTGATTGGAAGTGGGAGTTCAAATGATACTTTTAGGCTTCAAGGAGTGCAGGTGATGGAATTCTTAAGGAACTATCCTCAGTGGGGAGAGAACATAGACAAGTTGAGATTGTCAGGTGCCCCAAGAAACTTCATAGACCCTACTTCACTTGCAGAGCATTGCAGCCACTCTTACATAGTTCCCTCAAGTGAAAGTGAAGGACTAATTCAAGGAACAATAATTTGTCAAGTGTGCAAACGTCCCATGAAGAAGTTTGTGGTGTACCAGCCATGA 2022 0.4006 MQDDILLKKLLLTHDPDGRRLDSETMLHAVGNIMFHASTIVGASNLYSASFHKNDITEIETLGCCEPIACIISKLCKILCKCSGEGDINSRIISLFDLIGKYSWDAKVVLVLAAFAARYGEFWLLMQLYPGNTLAASISSLKQLPCNLRPLKPQIKALSLLVKIMMDVAMCIIKFESLPLQHVELGNDMCLVTKSLIYEAEYWITRSSLACFSQVMDFTTKRHEQVYSDSTIIAAWELSSLAYRLSDICNILRGQVDVCHREIEKNLYDMLLNLVHEEHIDNQKVLNLFFPSKNYLPLKDCATQVKLGVSELKNKIVLLLISKPQLLPMEQLFLLVQQTCEHPYNERLRDSYKIVWVPLPSSDTWTDDEESSFNFLSNSLPWYAVQKPRLLSSAVVKYIREQWNYKDEPIMVALDSNGNVTNTNALDMIKIWGARAYPFSTSKEAELWQNQNLTMQLLLADINPFIAYWVEQGRNICLYGSENLDWIQQFNDNITELKQAGLQLETIYVGNSRLGEHVKKIMTRTGEMNLSDPLSFTKVQFFWLRLESMRRSKLQLGRVPSSDHVLAELSALLDMDDKEEGWAVIGSGSSNDTFRLQGVQVMEFLRNYPQWGENIDKLRLSGAPRNFIDPTSLAEHCSHSYIVPSSESEGLIQGTIICQVCKRPMKKFVVYQP* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03786 673 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 2 672 IPR039299 GO:0010088
Rops11g03786 673 Pfam Sieve element occlusion N-terminus 2 279 IPR027942 -
Rops11g03786 673 Pfam Sieve element occlusion C-terminus 442 672 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03786 Rops-Chr11 71518587 71521929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03786 - - gmx:100819823 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03786 11 71518587 71521929 Rops11g03786 11 71518587 71521929 ECH
Rops11g03786 11 71518587 71521929 Rops11g03786 11 71518587 71521929 PCT