Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03782 ATGGGTCCTCACGGTGTTCCGGCGGCGGAGGCGCTTCTAGCGTCGGGTCGGAGCTCTGAGAAGCTTAGCCTACCGTTACTTCAATCCAAAATGAAATGCGACCCGGAAGGTTACGAATCGGAGCTTCTCCTTCTCCGCAACCAATTCAACTCTTCCTTGGAACTCTTTCAACAACAAGCCGCTATGAACTTCACTTCCATCACTGGCATCGGTAGCGACCCTACCGTAGCTAAAGACCTAGGCGATAGGGCTATGTTCCTTTCTCATGTCACTCCCTTCTACCCTAACCACCTCGCTGATTTCCCTCAAAAACTCGCTGATTTGCTTCGAATCGCTGCTCGTACGCTTCCCTCGGGGCTTCGATGCCACCTCACTCAGGCTCTTATTCTCCTCATCAATCGAAATATTGTTGATATTGGTGAAACGATGTCGTTGTTCATGGAGCTTCAAACCCTAGGTGATAGAACACTGAAGAAGTTGGCGTTTGATCACGTTGTTCATAGCATAAGGCGTATGAACCAAAAGCATAAGAATGAAGCTAAAAACCGTGCACTTCAGAATGTCCTGTTTTCCATGCTCCAGCAAGAGGATGAAGAGAGGGCCAAGAGGGCACTTGTGACTCTATGTGAGCTTCACAGGAGAAAGGTGTGGTTTGATGAGAGAACAGCTAATGCAATTTGCACTGCTTCCTTCCATCCAGCATCGAGGATTATGATAGCAGCTTTGTCGTTTCTGCTTGATTATGAAAAGATTGTAGACGATGAAGATAGTGATGCTTCAAGCAGCGACGATGAATTGAATGAATCACCTCAAGCTATCCTTAGTAAGGAGACAGTTTATAAGGCAAGTCACCAAGGTACGGTAGCCAGCAAAAAGAAAAAGAAAGCAAAACTGCAACGTGTCATACGCAGCATGAAAAAGCAACAACGCCGGTCATCTGAAAGGAGCAATAACATTTATTATTCACCTCTTAACCATCTGAAAGATGCTCAGGGTTTTGCCGAGAAGCTGTTCTCGCGTCTTCAGAATTGTAATGAACGATTTGAGGTTAAGATTATGATGTTGAAGTTGATTGCTCGAACAGTTGGACTTCACCGGTTAATTTTGTTAAACTTTTATCCTTTTCTTCAGAAATATATTCAGCCGCATCAACGTGACGTAACAAATTTGCTTGCAGCAGTGGTTCAGGCTTGCCATGATATGGTTCCTCCCGATGCAGTTGAGCCCTTGTTCAAACAAATAGTATATCAATTTGTACATGACCGCTCACGTCCAGAGGCTATCACTGTTGGACTAAACGCAGTTAGGGAGATCTGCATGCGCATGCCATTGTTAATGAATGAAGACTTGCTACAAGACCTTGCCCTATATAAGAAGTCACATGAGAAGGCAGTTTCAGTATCAGCTCGATCTCTGATTGCATTATTCAGAGAGGTTTGCCCTTCGCTGCTAGTTAAGAAGGACCGTGGCCGGCCCATTGACCCTAAGGCAAGACCAAAGGCCTATGGAGAAGTCAATGTTGCGACTGACGTTCCTGGTGCTGAGTTGTTGCAGATTACTGATAATGATGATGAACAGGAGAGTGGTGATTCTGATGATTCTCCATGTAGTGGCTCTGATGATGACCAGGAAAATGATCACATGAGTATTAATGATGACGATGAGAACCAGCTGTGCACTGATAATACAGGAAGTGATGGTGATGAAGCCAAAGATGATGATGTATCAGAAGATGAAGATGAGAGAAGTTCTGATAATGAAACTGATGTTAGTGATGCTGATGAGGATGACCTTGAAGACAGTGAGCAAGCTGATGAAGAGGACGGTGAGATTTCAGAACATGAAGATGATGATCTGCATGCTTTTAGTGATGATGGAAGTGTGGAGACAAAAAGTACATCAAAAGAGACTGCAAAAAAAAGGAAGTTTTCTGATTTTAATGGTCAACTTGTATCTGCTGATAAAAGTCTTCGGGCTTTGAAGAAATTGGCAGGGACAACAATGGGGCATCCCCTACCAGAATCTAATGATGGAATTCTTTCTAATGAGGACTTCCGGAGGATCAAGGAACTAAAGGCAAAAAAAGAAGCAAGAAATGCATTGGCTCAGCACGGACTAGCAAAATCAACAGCAATTAAGGTTCCAAGTTCTGATCAACTAAGTTTGAAGCGAGTGGATGGTACCATGCTTGAAGTTCATGTAAGGAAAAAGATGAACAAGGATGAAAGATTGGCATTGGTTAGAGCAGGGAGGGAAGAAAGAGGAAAATACTATGCTCGAACTGCTGTAAAACAGAAAAAGACGGGTGGACTAAGCAACCGACAAAAGGAGCACAAGAAGAAAATGCCGCTGGCTGCTAAGAGAAATAAGGTAGCAAGATCTCGGGTAGAGAAAAAGAAAAAACAACAGCGGGCTGGCAAACAGTTCCGTGGGAGGAAAGCCTGGAAACAATGA 2454 0.4393 MGPHGVPAAEALLASGRSSEKLSLPLLQSKMKCDPEGYESELLLLRNQFNSSLELFQQQAAMNFTSITGIGSDPTVAKDLGDRAMFLSHVTPFYPNHLADFPQKLADLLRIAARTLPSGLRCHLTQALILLINRNIVDIGETMSLFMELQTLGDRTLKKLAFDHVVHSIRRMNQKHKNEAKNRALQNVLFSMLQQEDEERAKRALVTLCELHRRKVWFDERTANAICTASFHPASRIMIAALSFLLDYEKIVDDEDSDASSSDDELNESPQAILSKETVYKASHQGTVASKKKKKAKLQRVIRSMKKQQRRSSERSNNIYYSPLNHLKDAQGFAEKLFSRLQNCNERFEVKIMMLKLIARTVGLHRLILLNFYPFLQKYIQPHQRDVTNLLAAVVQACHDMVPPDAVEPLFKQIVYQFVHDRSRPEAITVGLNAVREICMRMPLLMNEDLLQDLALYKKSHEKAVSVSARSLIALFREVCPSLLVKKDRGRPIDPKARPKAYGEVNVATDVPGAELLQITDNDDEQESGDSDDSPCSGSDDDQENDHMSINDDDENQLCTDNTGSDGDEAKDDDVSEDEDERSSDNETDVSDADEDDLEDSEQADEEDGEISEHEDDDLHAFSDDGSVETKSTSKETAKKRKFSDFNGQLVSADKSLRALKKLAGTTMGHPLPESNDGILSNEDFRRIKELKAKKEARNALAQHGLAKSTAIKVPSSDQLSLKRVDGTMLEVHVRKKMNKDERLALVRAGREERGKYYARTAVKQKKTGGLSNRQKEHKKKMPLAAKRNKVARSRVEKKKKQQRAGKQFRGRKAWKQ* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03782 817 MobiDBLite consensus disorder prediction 762 817 - -
Rops11g03782 817 MobiDBLite consensus disorder prediction 540 554 - -
Rops11g03782 817 MobiDBLite consensus disorder prediction 521 539 - -
Rops11g03782 817 MobiDBLite consensus disorder prediction 615 643 - -
Rops11g03782 817 MobiDBLite consensus disorder prediction 521 646 - -
Rops11g03782 817 Pfam NUC130/3NT domain 86 137 IPR012977 -
Rops11g03782 817 SUPERFAMILY ARM repeat 45 487 IPR016024 -
Rops11g03782 817 Coils Coil 288 311 - -
Rops11g03782 817 PANTHER HSDA/SDA1-RELATED 19 813 IPR027312 GO:0000055|GO:0042273
Rops11g03782 817 MobiDBLite consensus disorder prediction 780 817 - -
Rops11g03782 817 Pfam SDA1 446 813 IPR007949 -
Rops11g03782 817 MobiDBLite consensus disorder prediction 567 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03782 Rops-Chr11 71487148 71492837 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03782 K14856 - gmx:100816774 1256.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03782 11 71487148 71492837 Rops11g03782 11 71487148 71492837 ECH