Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03781 ATGAATCCTCTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGATCGGGCCAACCCTGTGGTGGCCAAAACTTCAGGTCAGTGTCAGTTAGGGCTTGATTCGACCATCAGAACGGTGAACTGTGCTTCCAAATCGAGTTTCTCCACTCAGGAATCGTCGCTTTGTGCGGATTCAGTTAAATCCACCACCGTCGTTTTGAATCACGACGATGACGATGCGGTGGTTCACGAGCCGCGTGATTCGAAGGTGTTTTCCGGTGGAAATGGCGGTGGTGTCGCCGGGAGTGTGGCTGGGATACTGTATAAGTGGGTGAATTACGGGAAAGGTTGGAGGTCGAGATGGTTTGTGCTTGAAGATGGTGTGCTTTCGTATTATAAGATTCATGGACCGGATAAGATCTTGATGAGTCCAGCGAAGGATAGGAGTGTGAGGGTGATCGGAGAGGAATCGTCGAAGTTTATGAAAAAAGCAAATTGGAATCTGAATCGGGCTACGAAGCAATGCAAGCCCTTCGGTGAGATACATTTGAAGGTTTCTTCTGTTCGTTCCAGCAAGTCTGATGACAAGCGGCTTTCCATATTTACTGGGACAAAAACTCTTCACTTGCGGTGTGTATCTAGAGAAGACAGGGCCATGTGGATTGAGGCCCTGCAGTCTGCAAAAGATCTCTTTCCTAGAGCTCTAACAAGTAGTGATCTTGCAACTTCAGAAGATATTGTAGTTTCGACAGAGAAGCTGCGAGCACGATTGTCACAGGGAGGCATAAGTGAAGAGATCATTAATGACTGCGAGTCTATTGTGCTCTCTGAAGTCTCTTATCTTCAGGGCAAGTTGAAGTTTCTTCAGCAGAAACATGTTATGTTGCTGGACACCTTAAAGCAACTAGAGTCAGAGAAAATAGAGTTGGAAACTACTGTAGTGGATGAAACAAAGGAACGTGAGTCATATTGTGGACAAGGGAATAGAAGGTTTAGTGATTTCTATTCTGTCATGTCGGAGGGCAGTGCTACGGATTCAGTAGCAGATAATGAAAGTCAAGATGGAGTAGATGCAGAAACAGATGATGATGATGATGTAGCATATTTTGATACGAATGAGATTTTGTATTCAGATGCCTTAAGAAGTGCTTCGTATCGAAGTAGGGAAGGTATGGGAAATGCCAGTATATATGATAGAGATTATATTCTTTATGATGGTTTGCATGGGTTTGAGAAGGGGATCAAAGATATAAGTTATCCATATGTCAAAAGAAGGGATAACTTACCAGAGCCGAAAGAGAAAGAGAAACCCATGGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTCTCTTCATTGCAAAAGTGTTTTGAAGACCTAGAGTATTCGTACCTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGGGGAATGATTTGATGAGAATACTAAATATTGCAGCTTTTGCTGTGTCTAGCTATGCGTCAACTGAAGGTCGGCAGTGCAAACCTTTTAATCCTCTACTAGGGGAGACTTATGAAGCTGACTATCCAGATAAAGGACTTAAGTTTTTTTCTGAGAAGGTTAGTCATCATCCAATGATTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAGTTCTGGGCAGACTCCAATTTGAAAGGAAAATTCTGGGGGCGTTCTATTCAGTTAGATCCTGTAGGTGTGCTCACCCTACAGTTTGAGGATGGTGAAACATTTCAGTGGAGTAAGGTCACCACTTCCATATATAATATCATACTAGGTAAAATTTATTGTGACCACTATGGTACCATGCACATCAAGGGCAGCCGCAACTACTCTTGCAAACTGAAGTTCAAAGAGCAATCTATCATAGACCGTAATCCACATCAGGTCCATGGGTTTGTTCAAGACAACAGAACCGGGGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGAAGCAATGTACTATGTACTTGGGGATCCAACTACGAAGCCAAAAGGTTACGATCCAATGACAGAAGCTGCATTGTTGTGGGAAAAGGACAATTATGTTTCCAAGACAAGATACAATCTCTCTCCTTTTGCAATTTCCTTGAATGAAATAACACCTGATTTAATAGAGAAGCTGCCTCCAACTGACTCAAGGTTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATATGAATTGGCAAATGCAGATAAACTAAGACTTGAACAGTTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCCAGATGGTTTAAGAAGGATGAGGATGGTTGTTACCGATACATGGGTGGATATTGGGAAGCAAGAGAAAAGAATAATTGGGATGGGATCTCTGATATATTTGGACAGAGTTGTGATTTGCCTTCGTGTTCTGAAGAGACCGTATCCTACTGA 2442 0.4287 MNPLCCIAPVSIDRDRANPVVAKTSGQCQLGLDSTIRTVNCASKSSFSTQESSLCADSVKSTTVVLNHDDDDAVVHEPRDSKVFSGGNGGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPAKDRSVRVIGEESSKFMKKANWNLNRATKQCKPFGEIHLKVSSVRSSKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSAKDLFPRALTSSDLATSEDIVVSTEKLRARLSQGGISEEIINDCESIVLSEVSYLQGKLKFLQQKHVMLLDTLKQLESEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGVDAETDDDDDVAYFDTNEILYSDALRSASYRSREGMGNASIYDRDYILYDGLHGFEKGIKDISYPYVKRRDNLPEPKEKEKPMGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSSYASTEGRQCKPFNPLLGETYEADYPDKGLKFFSEKVSHHPMIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIKGSRNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWEKDNYVSKTRYNLSPFAISLNEITPDLIEKLPPTDSRLRPDQRHLENGEYELANADKLRLEQLQRQARKMQERGWQPRWFKKDEDGCYRYMGGYWEAREKNNWDGISDIFGQSCDLPSCSEETVSY* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03781 813 Gene3D - 729 799 - -
Rops11g03781 813 FunFam Oxysterol-binding protein-related protein 2A 729 799 - -
Rops11g03781 813 MobiDBLite consensus disorder prediction 335 356 - -
Rops11g03781 813 ProSiteProfiles PH domain profile. 93 222 IPR001849 -
Rops11g03781 813 Coils Coil 278 312 - -
Rops11g03781 813 Coils Coil 740 760 - -
Rops11g03781 813 FunFam oxysterol-binding protein-related protein 1D isoform X1 518 691 - -
Rops11g03781 813 SUPERFAMILY PH domain-like 97 226 - -
Rops11g03781 813 SUPERFAMILY Oxysterol-binding protein-like 428 799 IPR037239 -
Rops11g03781 813 Gene3D - 93 224 IPR011993 -
Rops11g03781 813 Pfam Pleckstrin homology domain 98 219 - -
Rops11g03781 813 Pfam Oxysterol-binding protein 433 786 IPR000648 GO:0008289
Rops11g03781 813 SMART PH_update 94 224 IPR001849 -
Rops11g03781 813 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 96 785 IPR000648 GO:0008289
Rops11g03781 813 Gene3D - 518 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03781 Rops-Chr11 71477687 71485010 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03781 K20456 - gmx:100788779 1490.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03781 11 71477687 71485010 Rops11g03781 11 71477687 71485010 ECH