Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03747 ATGGGTCAAGCTGAGGAAAATAGTAATGTTGGAGCCGATCAGAAAGCCATTGATGATTGGCTTCCCATTACTGCCTCAAGGAAGGCCAAATGGTGGTCTTCAACTTTCCATAATCTCACAGCCATGGTTGGGGCTGGTGTCCTTAGTCTTCCCTATGCCTTTTCACATATGGGCTGGGGTCCCGGAGTTACAGTCCTTTTCTTGTCATGGGTCATCACCTTGTACACCCTATGGCAAATGGTGGAGATGCATGAAATGGTGCCTGGCAAGAGATTCGATAGGTATCATGAGTTGGGTCAACATGCCTTTGGGGAGAAGCTGGGTCTATGGATCGTGGTTCCACAACAGCTTATTGTTGAAGTTGGCACCTGCATTGTCTATATGGTCACTGGTGGCAAATCATTGAAGAAGGTTCATGACACCATTTGTCCAGATTGCCAAGATATCAAGACCTCATATTGGATTGTTATCTTTGCTGCTTTTAACTTATTCCTTGCTCAATGCCCCAACTTTCACTCCCTTTCCGTTATCTCTCTCGGTGCAGCTGCTATGTCTTTGATTTATTCAACCATTGCTTGGGGGGCTTGTCTAAATAAAGGGATTGAATCAAATGTGGACTATAGCCTCAAAGCTAACAACACAGCTGATGCTGCATTTAACTTCATGTCTGCCTTGGGAGATATAGCATTTGCTTATGCAGGTCACAGTGTGGTTTTGGAAATTCAAGCAACTATGCCCTCAACCCCTGAGGTTCCTTCCAAGAAACCCATGTGGAAAGGAGTTATTTTGGCATACATAGGAGTTGCTTTCTGCTACTTCCCTGTTGCCGTGATTGGATACTATATGTTTGGAAACTCAGTTGATGATAACATCCTCATCACACTAGAGCGCCCTGTTTGGCTCATTGCTGCTGCTAACTTGTTTGTCTTTGTCCATGTTATTGGAGGCTACCAGGTATTTGCAATGCCGGTGTTTGATATGTTTGAAACATACCTGGTTAAGCAATTAAAGTTTCCACCTTCTATTGCACTCAGATTATCAGTTCGCACCATATTTGTTGGAGTGACAATGTTAATTGGCATATGTATCCCATTCTTTGGTTCTCTTCTTGGATTATTTGGAGGATTTGCCTTTGCCCCAACATCATACTTTCTTCCATGTATCATATGGCTTAGAATCAAAAAACCCAAGAGATTTGGCCTCTCTTGGACAATCAATTGGATCTGCATTGTTCTTGGTATAGTGTTGATGACACTATCTCCAATTGGTGCTTTGAGGAATATCATCCTATCAGCCAGTGACTACAAGTTCTTCTCATAA 1320 0.4288 MGQAEENSNVGADQKAIDDWLPITASRKAKWWSSTFHNLTAMVGAGVLSLPYAFSHMGWGPGVTVLFLSWVITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQLIVEVGTCIVYMVTGGKSLKKVHDTICPDCQDIKTSYWIVIFAAFNLFLAQCPNFHSLSVISLGAAAMSLIYSTIAWGACLNKGIESNVDYSLKANNTADAAFNFMSALGDIAFAYAGHSVVLEIQATMPSTPEVPSKKPMWKGVILAYIGVAFCYFPVAVIGYYMFGNSVDDNILITLERPVWLIAAANLFVFVHVIGGYQVFAMPVFDMFETYLVKQLKFPPSIALRLSVRTIFVGVTMLIGICIPFFGSLLGLFGGFAFAPTSYFLPCIIWLRIKKPKRFGLSWTINWICIVLGIVLMTLSPIGALRNIILSASDYKFFS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03747 439 Pfam Transmembrane amino acid transporter protein 28 424 IPR013057 -
Rops11g03747 439 Gene3D Amino acid/polyamine transporter I 24 433 - -
Rops11g03747 439 PANTHER OS05G0424000 PROTEIN-RELATED 29 424 - -
Rops11g03747 439 FunFam Lysine histidine transporter 1 24 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03747 Rops-Chr11 71163942 71166698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03747 1 439 Organic Solute Cotransporters AT1G24400 69.161 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03747 K26385 - gmx:100786115 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03747 11 71163942 71166698 Rops11g03747 11 71163942 71166698 ECH