Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03744 ATGTGGTCAGTTCTACGAGCTCGAACGTGTTCCCGTTCTTCTTCCAATTTTCTTCAACCATGGAAGCTAGGGTTTACTACTTCGTCCGCAGTTAACGGCGGCGTCGTTAAATGCGTTCTGGATCTGCAGGAGATCGAGAAGGTTCTAACGGACGTTAAAGCTGACGACGTGAAGGTGATACCGGTTCCCAAACACTGCGTTTGGGCTGATTTCATGGTACTCGCCACTGGTAGGTCCACGTGGCACGTCAAGAATATCGCTCAAGCTCTAATTTACAAGGCTAAGCAGAAGCAGAAAGGAGCTGAACGAATGATGTTACCTAGTGTGGAAGGTCAAGCAGGAGGAAAATGGATCGTTATTGACTCTGGTAAAGTGATAGTTCACGCACTTGATGAAAAAGCTAGAGCTTACTACAATTTGGAGGGTCTTTGGACCCCTGGGACATTGCAAAATGAACCTATTGAGGATTTACAAAATGCCTTGGTGAAGGTTCGTCGGAAAAACAATTCGAAGAAACCCGCACAAAAGAATGCTTAA 537 0.4581 MWSVLRARTCSRSSSNFLQPWKLGFTTSSAVNGGVVKCVLDLQEIEKVLTDVKADDVKVIPVPKHCVWADFMVLATGRSTWHVKNIAQALIYKAKQKQKGAERMMLPSVEGQAGGKWIVIDSGKVIVHALDEKARAYYNLEGLWTPGTLQNEPIEDLQNALVKVRRKNNSKKPAQKNA* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03744 178 Gene3D Beta Polymerase, domain 2 40 157 IPR043519 -
Rops11g03744 178 PANTHER IOJAP SUPERFAMILY ORTHOLOG 26 158 IPR004394 -
Rops11g03744 178 FunFam Mitochondrial assembly of ribosomal large subunit 1 40 157 - -
Rops11g03744 178 NCBIfam ribosome silencing factor 43 144 IPR004394 -
Rops11g03744 178 Hamap Ribosomal silencing factor RsfS [rsfS]. 27 145 IPR004394 -
Rops11g03744 178 Pfam Ribosomal silencing factor during starvation 44 144 - -
Rops11g03744 178 SUPERFAMILY Nucleotidyltransferase 43 150 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03744 - - gmx:100500386 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03744 11 71148712 71151296 Rops11g03744 11 71148712 71151296 ECH