Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03731 ATGATGATGTTGGTGAATTCTGGTACTGGCCTTAAGAAACAGGTTTTTCCTATTAACTACGAAACAGAGATGTCACAACGTCTTCTAGAAGCTTCTCATCGCGGTGACGCTGACTCTGCTTTTGAATGTCTCGCGTGTTCATTGGTTGACGTGAACTTTATCGGAACGGTGTCGTTGAAGTTCAAAACGACGGAGATCGTGTTACAAGACGAGTCGCCTCACCGAGTTCACTCGGTGTACGAAGAGTTCAAGACCGATGTAAATGCTCTGTTCTTGGCTGCACATTCTGGAAATTTGACACTCCTCAGGAAGCTTCTGAATGTTGGAGCTAATGTAAATATGAGATGCTTCCGGGGCTATGCCACAACAGCAGCAGTGAGAGAAGGCCATTTAAAAGTACTAGAGGTCCTTATCAATGCTGGAGCATCACAACTTGCATGTGAGGAGGCTTTACTTGAAGCAAGTTATTTGGGAAGGGCTAGGTTTGCTGAACTACTCATGCAATCCAACATGATCCGTTCTCATGTTGCAATTCATGCACTTGTGTCTGCATGTTGCAGAGGCTTCATTGAGGTTGTTGATGTACTCATCAAGCATGGAGTGGATGCCAATGCAATTGATAGGACGCTGCTTCAATCTTCAAAGCCATTTCTTCACGCTAATGTTGATTGCAATGCATTATTCGCTGCTGTTGTCAGCAGACAGATTAATGTTGTTAGAGTACTCTTGCAGGTTGGTATCAGGCTTGATATCAAGGTCAAACTGGGGGCTTGGTCATGGGAAACAGAAACAGGAGAAGAATTTCGTGTAGGTGTTGGACTAGCTGAGGCTTATCCAATCACATGGTGTGCTATAGAGTATTTTGAATCCAGTGGTGCTATATTGCAAATGCTGCTTTATCACCTCTCTCCTAATAGTTTGCACATGGGGAGGACTCTCTTGCACCATGCCATCGTTTGTAACAATGAAAAAGCAGTAAATATACTTCTTAATAGTGGTGCAGATACAGAAGTGGTAGTGCAAACTACTGAAGAAACCAACATATACCCTATTCACATGGCTGCAAGGCTTGGATCATGTAACATTCTCCGGTGCCTGATTAATAGTAATTGTAACTTGGACTCTCAAACAAAATCTGGAGATACAGCATTGATGATCTGCACAAGGTATAAACATGAGAAGTGCCTTAGAATCCTAGTATCAGCAGGTGCTGATTTAGGGATGGTAAATTCATCTGGTCATTGTGCAACTTCAATAGCAAACTCTGTTCAGTGGACTCAAGTATTCCAGAAAGCAATTTTGGATGTGATTAGAGCCGGAAAGGATGTTAAATCAAGCAATGCCTCTAGATTTTCTGCTTTGTTATTTGTAACTCGATTAAATGATATAGAGGGTTTGAAGAAACTCATTGAAAACAGCAACATAAATCTAGATGAGCAAAATGCATATGGTTTTTCAGCTGCTATGATAGCTGTGGCAGGTGATTACGTGGAGGCTTTCAGGTTGCTTCTATATGCTGGGGCTGATGTTACTATGCTTGAAAACAAGTATGGTTTGACAGCCCTTAACCTCATAGACATGAGCCAAAATGTGGAAGTGTTTCACAAGGTAATACTTGAATATGAACTTAAAAAAGGATGCAATAGTTCAACTGAGGTGAATCCTCTCCACCGTGCAGCTTGCTATGGGGACATAAACATTGTTCACAAATTATTAAAAGAAGGGTATGATATCAATGCTTTTGATGGACATGGTTATACACCATTGATGTTAGCAGCAAGAGGATGCCGTGGTGAAATGTGTCAACTTTTGATTTCAAGTGGAGCCAAATGTGATATCCAAAATGAGAGACATGAGACAGCACTTTTACTTGCTAGAGAAAATGGAATAGGGAATGATGCAGAGTGTGTGATAATGGATGAGCTAGCTAGAAGAGTAGTCTTGTGTGGTGCTTCTGTAAAGAAGCATACAAAGTGTGGTAAAGGAAGACCTCATAGTAAGCAATTGGTAATGGTGAGGGGTGCTGGAATCTTACGTTGGGGGAAATCAAATAAGAGAAATGTGGTTTGTAAAGAGGCTGAGGTTGGACCAAGTGAAAAATTTAGATGGAATCGTAGGAAGAAGTTTGATGTTGATGAGCCAGGAATGTTCCATGTAGTCACTACAAAAAATAAGCAGGTGAATTTTGTATGTGAAGGTGGGGTTGAAATGGCTGAGTTGTGGGTAAAGGGGATTAGATTGGTAACAAGAGAAGCCATTTTTGGTCAGAGAGCTAATAATGTCTGA 2286 0.4125 MMMLVNSGTGLKKQVFPINYETEMSQRLLEASHRGDADSAFECLACSLVDVNFIGTVSLKFKTTEIVLQDESPHRVHSVYEEFKTDVNALFLAAHSGNLTLLRKLLNVGANVNMRCFRGYATTAAVREGHLKVLEVLINAGASQLACEEALLEASYLGRARFAELLMQSNMIRSHVAIHALVSACCRGFIEVVDVLIKHGVDANAIDRTLLQSSKPFLHANVDCNALFAAVVSRQINVVRVLLQVGIRLDIKVKLGAWSWETETGEEFRVGVGLAEAYPITWCAIEYFESSGAILQMLLYHLSPNSLHMGRTLLHHAIVCNNEKAVNILLNSGADTEVVVQTTEETNIYPIHMAARLGSCNILRCLINSNCNLDSQTKSGDTALMICTRYKHEKCLRILVSAGADLGMVNSSGHCATSIANSVQWTQVFQKAILDVIRAGKDVKSSNASRFSALLFVTRLNDIEGLKKLIENSNINLDEQNAYGFSAAMIAVAGDYVEAFRLLLYAGADVTMLENKYGLTALNLIDMSQNVEVFHKVILEYELKKGCNSSTEVNPLHRAACYGDINIVHKLLKEGYDINAFDGHGYTPLMLAARGCRGEMCQLLISSGAKCDIQNERHETALLLARENGIGNDAECVIMDELARRVVLCGASVKKHTKCGKGRPHSKQLVMVRGAGILRWGKSNKRNVVCKEAEVGPSEKFRWNRRKKFDVDEPGMFHVVTTKNKQVNFVCEGGVEMAELWVKGIRLVTREAIFGQRANNV* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03731 761 ProSiteProfiles Ankyrin repeat region circular profile. 551 582 - -
Rops11g03731 761 Pfam Ankyrin repeats (3 copies) 347 408 IPR002110 GO:0005515
Rops11g03731 761 Pfam Ankyrin repeats (3 copies) 556 633 IPR002110 GO:0005515
Rops11g03731 761 PANTHER ANKYRIN REPEAT-CONTAINING 20 742 - -
Rops11g03731 761 ProSiteProfiles Ankyrin repeat region circular profile. 584 616 - -
Rops11g03731 761 Gene3D - 272 338 IPR036770 -
Rops11g03731 761 ProSiteProfiles Ankyrin repeat region circular profile. 309 338 - -
Rops11g03731 761 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Rops11g03731 761 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Rops11g03731 761 Gene3D - 339 431 IPR036770 -
Rops11g03731 761 Gene3D - 541 663 IPR036770 -
Rops11g03731 761 ProSiteProfiles Ankyrin repeat profile. 309 341 IPR002110 GO:0005515
Rops11g03731 761 SUPERFAMILY Ankyrin repeat 310 637 IPR036770 -
Rops11g03731 761 Gene3D - 432 540 IPR036770 -
Rops11g03731 761 ProSiteProfiles Ankyrin repeat profile. 346 378 IPR002110 GO:0005515
Rops11g03731 761 Gene3D - 15 175 IPR036770 -
Rops11g03731 761 Gene3D - 176 262 IPR036770 -
Rops11g03731 761 ProSiteProfiles Ankyrin repeat profile. 551 583 IPR002110 GO:0005515
Rops11g03731 761 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Rops11g03731 761 SUPERFAMILY Ankyrin repeat 75 254 IPR036770 -
Rops11g03731 761 ProSiteProfiles Ankyrin repeat profile. 584 616 IPR002110 GO:0005515
Rops11g03731 761 ProSiteProfiles Ankyrin repeat profile. 379 411 IPR002110 GO:0005515
Rops11g03731 761 SMART ANK_2a 584 613 IPR002110 GO:0005515
Rops11g03731 761 SMART ANK_2a 117 146 IPR002110 GO:0005515
Rops11g03731 761 SMART ANK_2a 222 251 IPR002110 GO:0005515
Rops11g03731 761 SMART ANK_2a 85 114 IPR002110 GO:0005515
Rops11g03731 761 SMART ANK_2a 449 477 IPR002110 GO:0005515
Rops11g03731 761 SMART ANK_2a 309 338 IPR002110 GO:0005515
Rops11g03731 761 SMART ANK_2a 483 512 IPR002110 GO:0005515
Rops11g03731 761 SMART ANK_2a 551 580 IPR002110 GO:0005515
Rops11g03731 761 SMART ANK_2a 346 375 IPR002110 GO:0005515
Rops11g03731 761 SMART ANK_2a 176 205 IPR002110 GO:0005515
Rops11g03731 761 SMART ANK_2a 379 408 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03731 Rops-Chr11 71007049 71011894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03731 310 407 Miscellaneous Gene Families AT1G05640 32.039 1.65e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03731 - - gmx:100795638 1293.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03731 11 71007049 71011894 Rops11g03731 11 71007049 71011894 ECH