Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03726 ATGTTTGGCTCTCAACCTTCTTCTTCACCCTTCGGAACCCCTTCTTCAACCCCAGCATTTGGTACCCCATCTTCAACCCCAGCCTTCGGAACCCCATCTTCTACCCCTGCATTCGGTACCCCAGGTTTTGGAACCCCATCTTCAACCCCAGCATTTGGGTCCTCTTCTCAACCTGCCTTCGGTTCTTCCCTCTTTTCCACACCATTTTCTTCTCAACCACAACAACCGCAGCAACAAACTCCACTGTTTCAACAACCACCTTCTACTGGTTTTGGCTTTCAGAATTTTCAGCCAACACCACAACCCTCTCCATTCCCAAATGCTCAATTAACTACTCAGATGGCTAACGTTGCTCCTGTTCCTTTCTCTCTCGCCGATCGCGATGTTCAAACAATCGTGGATGCTTATAAGGAAGATCCTGGAAACGCCAAGTACGCTTTTAAGCATTTGTTATTCAGTGTAATAGAACCACAGTTTAGGGTGAAGCCTGCTGGTATTTCAGACATCATGTGGGCGGAGGCTATGGGGAAGCTTGAGGGTATGGAAAGTGCTGATAGAGAACGTCTGTGGCCACAACTTGTTCAGGGATTTAAGGATCTTTCCCAACGCCTTAAGATCCAAGATGAAGTCATTGTTTCAGATGCTGAGAGATTACGTATAACCCAAAGCAATGTTAAAATGCTCCAAAGACATTTTCAAGCTGATACTCTTCCCTGGATCCAAAAATTGAAACAGAAAGAACAAATTCTCCAGCAACGTCTTTTAAGAGTAATGAGAATAGTGGAGGCATTGGAGGGAAAAGGGTGCCGTATACCCTTGACAAAAGGGGAAGCTGAACTTGCTGAGAAATTAGCCACAATAACTAGACAGCTGAAAGGATCTGGAGCAGAACTATCTAGACGGGTGCAAAATCTATTAACTGTATCTCGTGTTCAGGTAAGCAATGGATTTGGTGGCTCAGTTTATCTTCCAGGGTCAACCAAAATTGATGATCAGAGTCTTGCTGACCTGCAAGAGGTTTTACAGCAGCAGATGGAGGCCATAGCAAGACTTGGCAGTGTTCTGAAGCGAGATATAAGGGATACGGAGATTATGATGGCTGAGGACACAGGAGCAGCTGAAAATGGGAATTTAATCTGA 1140 0.4518 MFGSQPSSSPFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPGFGTPSSTPAFGSSSQPAFGSSLFSTPFSSQPQQPQQQTPLFQQPPSTGFGFQNFQPTPQPSPFPNAQLTTQMANVAPVPFSLADRDVQTIVDAYKEDPGNAKYAFKHLLFSVIEPQFRVKPAGISDIMWAEAMGKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWIQKLKQKEQILQQRLLRVMRIVEALEGKGCRIPLTKGEAELAEKLATITRQLKGSGAELSRRVQNLLTVSRVQVSNGFGGSVYLPGSTKIDDQSLADLQEVLQQQMEAIARLGSVLKRDIRDTEIMMAEDTGAAENGNLI* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03726 379 MobiDBLite consensus disorder prediction 1 106 - -
Rops11g03726 379 MobiDBLite consensus disorder prediction 1 98 - -
Rops11g03726 379 Pfam Nucleoporin complex subunit 54 162 306 IPR025712 -
Rops11g03726 379 PANTHER NUCLEOPORIN P54 1 371 IPR024864 GO:0005643
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03726 Rops-Chr11 70906335 70910189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03726 K14308 - gmx:100797030 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03726 11 70906335 70910189 Rops11g03726 11 70906335 70910189 ECH