Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03724 ATGTCGCTTGCATCGTTCTCCATCATCCGCCACCGCGCGGTGGCTTCCGCAGCCCCGTTCCTTCTCCGGCGATTTAGTTGCCTCCCAATCGCCGCTAGGCAACAAAACCCTAAACAAGTAACCCCAAACAAGAACCTCCTGAAGGCGAAACAAACATTGAAGGAGTTCTCTTCTCTTGCTCCCGTTCTCTCCCATGAAGACAACCTCCCTCTCTCCGAATCCCAGGCTGTCGGTGTCGTTGCCGCTTCTCAGGCCAACTACATGCGCGTCATCGTCCAATCTCTTCCCGAAGAACCTTCTGTTGAGCTTTTATGTGTGGTGAGGGCGCTGTTGAAGAAGATTAAGCGTAGGGTTATGGTTGGGGATAAGGTTCTGGTAGGTTCCATTGATTGGGTGGATGGTAGGGGTATGATTGAGAATGTGTTTCACCGAAATTCTGAGGTACTTGACCCTCCGGTTGCCAACGTGGACCATTTGTTACTCCTCTTCTCGCTTGAACAACCCAAGCTTGAGCCGTTTTTGCTTACTCGGTTTTTGGTGGAAGCTGAATCAACTGGGATTCCTCTCACGCTGGCACTTAACAAAATGGAACTTGTTGATAAAGAGACCATGGATTCGTGGAAGGCTAGGCTACGTGATTGGGGCTATGATCCTATTTTTTGCAGTGTTGAATCGGGACATAACCTTGATCTTCTTGCGTTCAAATTGAGGGATCAAACAACTGTGATTGTGGGTCCTAGTGGAGTTGGGAAATCTAGTTTGATCAATGCGCTTAGAAGCAATCCTCGTGTGTCTGATGCTGCAGATGGAGACAATTGGTTTGAGCCTATTTTAGGTAGCAAGTGGTATGAGGATCAGCGAGTAGGGGAGGTTTCGACGAGAAGCGGCAGAGGGAAGCATACCACTCGCCATGTCACTCTGCTTCCGATATCTGGAGGGGGTTATCTTGCTGATACTCCTGGATTTAACCAGCCTAGTTTGTTGAAAGTGACTAAGCAGTCTCTTCCACAGATCTTTCCTGAAATCAGGAAAATGCTTAGTGCCAATGCGCCTGCAAAATGTGCTTTTAACAATTGCTTGCACCTGGGTGAACCTGGCTGCATTGTGAAGGGGGATTGGGAGAGATATTCATTCTATCTTCAACTTCTTGATGAAGTTAGAATCAGAGAGGAGTTCCAGTTGAGGACATTTGGAACTAAAAGGGAAGGTGATGTAAGGTTCAAAATTGGAGATATGGGTGTTCAGCAAGCAGAACCACGGTTGGAACCTAAGAAGCATAGGAGACAGTCTCGGAAGAAGATTAACCAGTCAATTTTGGATGAATTGGATGATGACGACAATTTGCTTGATGAGGAGAATGATCCCGTCTTAAGGGCTATGAGTAATGAAAACTCGTAG 1398 0.4707 MSLASFSIIRHRAVASAAPFLLRRFSCLPIAARQQNPKQVTPNKNLLKAKQTLKEFSSLAPVLSHEDNLPLSESQAVGVVAASQANYMRVIVQSLPEEPSVELLCVVRALLKKIKRRVMVGDKVLVGSIDWVDGRGMIENVFHRNSEVLDPPVANVDHLLLLFSLEQPKLEPFLLTRFLVEAESTGIPLTLALNKMELVDKETMDSWKARLRDWGYDPIFCSVESGHNLDLLAFKLRDQTTVIVGPSGVGKSSLINALRSNPRVSDAADGDNWFEPILGSKWYEDQRVGEVSTRSGRGKHTTRHVTLLPISGGGYLADTPGFNQPSLLKVTKQSLPQIFPEIRKMLSANAPAKCAFNNCLHLGEPGCIVKGDWERYSFYLQLLDEVRIREEFQLRTFGTKREGDVRFKIGDMGVQQAEPRLEPKKHRRQSRKKINQSILDELDDDDNLLDEENDPVLRAMSNENS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03724 465 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 145 325 IPR030378 GO:0005525
Rops11g03724 465 MobiDBLite consensus disorder prediction 416 465 - -
Rops11g03724 465 NCBIfam ribosome small subunit-dependent GTPase A 118 261 IPR004881 GO:0003924|GO:0005525
Rops11g03724 465 ProSiteProfiles EngC GTPase domain profile. 154 323 IPR010914 GO:0003924|GO:0005525
Rops11g03724 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 388 IPR027417 -
Rops11g03724 465 Pfam RsgA GTPase 141 327 IPR010914 GO:0003924|GO:0005525
Rops11g03724 465 Gene3D Probable gtpase engc; domain 3 329 391 - -
Rops11g03724 465 Gene3D - 143 327 IPR027417 -
Rops11g03724 465 Hamap Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 76 390 IPR004881 GO:0003924|GO:0005525
Rops11g03724 465 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 47 447 IPR004881 GO:0003924|GO:0005525
Rops11g03724 465 Gene3D - 71 142 IPR012340 -
Rops11g03724 465 SUPERFAMILY Nucleic acid-binding proteins 76 144 IPR012340 -
Rops11g03724 465 CDD YjeQ_EngC 154 384 IPR004881 GO:0003924|GO:0005525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03724 K06949 - gmx:100796145 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03724 11 70882939 70883574 Rops11g03724 11 70882939 70883574 ECH