Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03716 ATGGAGTTCTCTCAAGATGACTTTGATCGGTTACTGTTATTCGAGCATACGCGAAAAACCGCTGAAGCGAACTACGCTGAAAACCCTCTTGACGCTGATAATCTGACCAAATGGGGTGGAGCTTTGATCGAGTTGTCGGCATTTCAAAATCCCAGGGATTCCAAGAAGATGATTGATGATGCCCTTTCGAAGCTTGAGGAAGCTGTACAAATCAATCCAGCAAAGCACGATGCTCTTTGGTGCTTGGGAAATGCACACACGTCTTATGCATTTCTAACACCTGATACCATTGAGGCAAGGGGTTATTTTGACAAGGCTTATGAGTATTTCCAGAGAGCTGTGGATGTGGATCCCGAGAATGAGCTCTATAGAAAGTCCTTGGAAGTTGCTGTTAAGGCCCCAGAACTACACATGGAGATCCACAAAAATGGGCTTGGTCAGAGTAGTTTTGGAGGATCCTCTGCTTCTTCAAAAGGAAAGGAATCTAAAAAGCAGAAGAACAATGACTTAATGTATGACATATTTGGATGGGTTATTCTTGCAGTAGGGATAGTAGCATGGGTGGGAATGGCCAAATCTCACATTCCGCCGCCACCTCCTCCAAGATAA 609 0.445 MEFSQDDFDRLLLFEHTRKTAEANYAENPLDADNLTKWGGALIELSAFQNPRDSKKMIDDALSKLEEAVQINPAKHDALWCLGNAHTSYAFLTPDTIEARGYFDKAYEYFQRAVDVDPENELYRKSLEVAVKAPELHMEIHKNGLGQSSFGGSSASSKGKESKKQKNNDLMYDIFGWVILAVGIVAWVGMAKSHIPPPPPPR* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03716 202 MobiDBLite consensus disorder prediction 143 163 - -
Rops11g03716 202 ProSiteProfiles TPR repeat profile. 87 120 IPR019734 GO:0005515
Rops11g03716 202 Gene3D Tetratricopeptide repeat domain 1 152 IPR011990 GO:0005515
Rops11g03716 202 SUPERFAMILY TPR-like 22 128 IPR011990 GO:0005515
Rops11g03716 202 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 1 200 IPR010547 GO:0005742|GO:0045040
Rops11g03716 202 Pfam Plant specific mitochondrial import receptor subunit TOM20 8 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03716 Rops-Chr11 70845790 70848842 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03716 - - gmx:100775949 318.546