Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03713 ATGGTCGTTGCACAGAAAGTCAAGGAAGCTGAAATCACCGAGCAGGATTCACTTCTTCTGACGAGGAACCTGCTCCGAATTGCCATATTCAATATCAGTTATATCAGAGGACTATTTCCTGACAAGTACTTCAATGATAAGTCTGTTCCTGCATTAGAGATGAAGATCAAAAAACTTATGCCAGTGGATGCTGAATCTCGCAGACTGATTGATTGGATGGAGAAAGGTGTTTACGATGCCTTACAGAAGAAATACCTGAAGACGCTTCTATTCTGTGTGTGTGAAGCACTAGATGGACCTATGATCGAGGAATATGCATTTTCCTTTAGCTATTCAGATTCTGACAAACAAGAGGTTTCCATGAATATCAACCGTACTGGAAACAAGAAGCAAGGGGGGACCTTCAAGTGTAACTCGACCACAGATATTACTCCCCAGCAGATGAGGAGTTCTGCTTGTAAAATGATCCGAACTCTAGTTCAGTTGATGAGAACTCTGGAGAAAATGCCAGAAGAGCGTACCATTCTGATGAAGCTCCTGTACTATGATGATGTGACGCCAGCTGATTATGAGCCTCCCTTCTTCAGGGGCTGCACAGAAGAAGAAGCTCACCATCCGTGGGCAAAAAATCCATTGAAAATGGAGGTGGGGAATGTAAACAGCAAGCATTTTATGTTAGCACTAAAGGTCAAGAGTGTGCTTGATCCTTGTGAGGATGATAATGAGGGAATCCAAGATGACATGAGCACTGGTGATGATTCCATGCAAAAGGATGATTATTATGATACTGACAGTGAGGTTGATCATGTTCCAGGTGATCAATATATGGTTGCTCCGATAGAGAAACAGCAAGCTGAGGAAGACAATGGCATGATTGATGAAGACAATACCCAGGACCCTGTGGAAGATGAGCAACAATTGGTCCGGGTCAAGGAGTGGATCAACTGTTGTCACCTTGAAACTATTGAGCTTACTGACGTTCTATCAAATTTTCCAGACATCTCAGTGGTTCTAACTGAAGAGATCATGGACAAGCTCATCAAGGAAGGTGTGCTATCAAAAATAGGGAACGACTCCTATTCCATTAATAAGGACAAGAAATCTGAATATGAGTTCGCCATCGTGCAAGAAGAAATTGATGGTCGAAGTCCTCAAGTCTTTGACAGAGCTTTGCAGGTTGAAGATCGCTTATACATGAAAGCTCTCTATCATGTTCTTCCGAAGAATTATGTGTCAGTCACAAAGCTTCAAAGCTTGCTTGAGGGAGAAGTAAACCAGACAGCAGCACGAAAGATAATTGATAAAATGACTCGGGATGGGTTTGTTGAACCTAAAGGCAGCAAAAGATTAGGGAAGCGTGTGATCCATTCTGAATTGACTGAGAGAACATTCATTGAGGTTCAGAAAGCTCTAAGTGCTGCTGAAGCTATGGATGTTGATCACTGTGAACCAAATAGCAAGTCCAAATTAACTGGTTTCCGTATAAATGGAAGCAACTATGACGTGTCCACGTGTGGTGTTCTCCACTCCATTGGATCAGATTTAACACGAATGAAAGTGACATCTGATACAAATTATACTGACTCCAGGAGTGGACAGAAAATGTCAAACGCAAAAGAGCCCGGGAGCACCCCCACAAGCAGGGTTGAGGCAACTGCTTCAAGAGAGAGTTTTGCACCGGGCAAAGAGAACAGCACAGCAAATGGAAACAGCATTGCAAATCAAGGTGAGCAAGCTGATAAAATTATCTGCAGTAGGTCCTCACAAGACAAGCGACCCAGGAAAACAAGCGCGGTCAAGGAGCCTATCCATCAAAATATGAAGCGTCAGAGATCTCAGGCTCCGTGA 1848 0.4318 MVVAQKVKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPDKYFNDKSVPALEMKIKKLMPVDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEALDGPMIEEYAFSFSYSDSDKQEVSMNINRTGNKKQGGTFKCNSTTDITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDDVTPADYEPPFFRGCTEEEAHHPWAKNPLKMEVGNVNSKHFMLALKVKSVLDPCEDDNEGIQDDMSTGDDSMQKDDYYDTDSEVDHVPGDQYMVAPIEKQQAEEDNGMIDEDNTQDPVEDEQQLVRVKEWINCCHLETIELTDVLSNFPDISVVLTEEIMDKLIKEGVLSKIGNDSYSINKDKKSEYEFAIVQEEIDGRSPQVFDRALQVEDRLYMKALYHVLPKNYVSVTKLQSLLEGEVNQTAARKIIDKMTRDGFVEPKGSKRLGKRVIHSELTERTFIEVQKALSAAEAMDVDHCEPNSKSKLTGFRINGSNYDVSTCGVLHSIGSDLTRMKVTSDTNYTDSRSGQKMSNAKEPGSTPTSRVEATASRESFAPGKENSTANGNSIANQGEQADKIICSRSSQDKRPRKTSAVKEPIHQNMKRQRSQAP* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03713 615 PANTHER HORMA DOMAIN-CONTAINING PROTEIN 1 4 612 - -
Rops11g03713 615 SUPERFAMILY "Winged helix" DNA-binding domain 400 475 IPR036390 -
Rops11g03713 615 Pfam HORMA domain 17 223 IPR003511 -
Rops11g03713 615 SUPERFAMILY The spindle assembly checkpoint protein mad2 11 237 IPR036570 -
Rops11g03713 615 ProSiteProfiles HORMA domain profile. 15 230 IPR003511 -
Rops11g03713 615 ProSiteProfiles SWIRM domain profile. 353 453 IPR007526 GO:0005515
Rops11g03713 615 MobiDBLite consensus disorder prediction 584 607 - -
Rops11g03713 615 Gene3D HORMA domain 5 274 IPR036570 -
Rops11g03713 615 Gene3D - 388 455 IPR036388 -
Rops11g03713 615 FunFam Meiosis-specific protein ASY2 5 272 - -
Rops11g03713 615 MobiDBLite consensus disorder prediction 522 583 - -
Rops11g03713 615 MobiDBLite consensus disorder prediction 522 615 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03713 K12778 - gmx:100792473 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03713 11 70777920 70783206 Rops11g03713 11 70777920 70783206 ECH