Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03707 ATGAAGAAGCGTTATCCTCTCCTTGAGAGAAGGTGGTTCCTTGGGTTAGCCATAGTAGGGTTGATAGGTGGGGCGTTGTTCATGACCACGGTGATCACAACCTCCGAAAACCGGTTCCTATGCCCAATTGGATCCGGGATCCGAACCCGATTGGGGGAGGATTACAACCCGACACCGATCCAGCTTCGTGCAATACTCCACTACGCCACGTCACGTGTGGTTCCACAACAATCCGTGTCGGAAATCAAGATCAGCTTAGATGTTTTAAAATCACTTGGTCGTCCTTCCAACTTTCTCGTCTTCGGACTCGGCCATGATTCTCTCATGTGGGCTTCGTTGAACCCACGTGGCAACACTTTGTTCCTCGAAGAGGACCCTAAGTGGGTCCAATCGGTTCTCAAGGACGCACCGGGCCTCCGAGCCCATACGGTTCGTTACCGAACCCATCTTCGTGAAGCCAACAAACTCATCTCCTCGTACCACTCCGAACCTACGTGTTCCCCTTCCAAGGCTTACCTACGAGGCAACGAAGCGTGCAAGCTTGCGCTTCAGAATCTACCTGACGAGGTTTATGATACGGAGTGGGATCTTATTATGATTGATGCGCCCAAAGGTTATTTCGCCGAGGCACCTGGTCGTATGGCGGCGGTGTTTTCCGCCGCTGTTATGGCGAGGAATAGGAAGGGATCCGGTGTGACGCATGTGTTCCTGCACGACGTGGATCGGAAGGTGGAGAAGCGTTATGCTGAGGAGTTTCTTTGTAAGAAGAATTTTGTTAACGGTGTTGGGAGGCTCTGGCATTTCAAGATACCACCGTCATCTAATGCCACTGATGATGTTCGTTTCTGTTAG 852 0.5141 MKKRYPLLERRWFLGLAIVGLIGGALFMTTVITTSENRFLCPIGSGIRTRLGEDYNPTPIQLRAILHYATSRVVPQQSVSEIKISLDVLKSLGRPSNFLVFGLGHDSLMWASLNPRGNTLFLEEDPKWVQSVLKDAPGLRAHTVRYRTHLREANKLISSYHSEPTCSPSKAYLRGNEACKLALQNLPDEVYDTEWDLIMIDAPKGYFAEAPGRMAAVFSAAVMARNRKGSGVTHVFLHDVDRKVEKRYAEEFLCKKNFVNGVGRLWHFKIPPSSNATDDVRFC* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03707 283 NCBIfam TIGR01627 domain 63 283 IPR006514 GO:0045492
Rops11g03707 283 Gene3D Vaccinia Virus protein VP39 71 282 IPR029063 -
Rops11g03707 283 Pfam Polysaccharide biosynthesis 81 268 - -
Rops11g03707 283 PANTHER OS11G0490100 PROTEIN 27 283 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03707 Rops-Chr11 70675000 70676433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03707 - - gmx:100791951 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03707 11 70675000 70676433 Rops2g01351 2 19253912 19255050 PCT