Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03694 ATGGCTGCTTCTCTTGTGCTCTCTACCTCTTTCTCTTCCACATATCATCCATCCCTTTTTACCTCGTATTCTTCGAATTCAATCTCCAAAAGAAAACAGAGTTTGCAATGCTTCTCCTCTTACTTGCCATATTCTAATTCAAAAGCACTGATTTTTTCTCGAAAGTTCGTTACCCATTGTTCAATAAGGGAAAAAGATTCGAGCTTTGTGGGTGAGGATTCCGCGGCTTTTGATTTGGGGGAACAGAAAATATCTTCATGGATTTATTTCACTGCAATTTTGGGAGTGGTGCTGTTTGTTCTGAACGTGGCATGGATTGATAATTCAACTGGCTTCGGCAAAGCTTTCGTTGATGCTGTTTCAGGGCTTTCAGATTCTCACGAGGTGGTAATGTTGATCCTAATTCTCATATTTGCCATCGTCCACAGTGGCTTGGCTAGCCTCCGGGACACTGGTGAGAAACTCATTGGAGAAAGAGCTTACCGTGTTCTTTTTGCAGGGATATCACTACCTTTGGCTGTCACTACCGTTGTGTATTTTATTAACCACAGATATGATGGACTTCAACTCTGGCAGCTCCAAAACGCTCCTGGGATTCATCAACTTGTGTGGCTTTCTAATTTCATCTCTTTCTTTTTCCTATATCCTTCAACCTTCAATCTTCTAGAGATTGCAGCAGTTGACAAGCCTAAATTACATCTATGGGAAACTGGGATCATAAGAATAACCAGGCATCCGCAGATGGTTGGACAGGTTATGTGGTGTCTTGCTCATACGGTTTGGATTGGAAATTCAGTGGCTGTTGCAGCTTCAATTGGCTTAATTGCACATCATCTATTTGGTGCATGGAATGGAGACAGGAGACTGGCTAAAAGATATGGGAAAGATTTTGAGATGGTTAAGGGTCGAACAAGTATTGTTCCTTTTGCAGCAATCCTTGATGGCCGTCAAAGATTACCTCAAGATTTCTATAAGGAGTTTATTCGACTACCATACTTGACAATTACTGCATTAACATTAGGAGCTTACTTTGCACACCCTCTTATGCAGGCTTCTAGTTTCAACCTTCATTGGTAG 1077 0.415 MAASLVLSTSFSSTYHPSLFTSYSSNSISKRKQSLQCFSSYLPYSNSKALIFSRKFVTHCSIREKDSSFVGEDSAAFDLGEQKISSWIYFTAILGVVLFVLNVAWIDNSTGFGKAFVDAVSGLSDSHEVVMLILILIFAIVHSGLASLRDTGEKLIGERAYRVLFAGISLPLAVTTVVYFINHRYDGLQLWQLQNAPGIHQLVWLSNFISFFFLYPSTFNLLEIAAVDKPKLHLWETGIIRITRHPQMVGQVMWCLAHTVWIGNSVAVAASIGLIAHHLFGAWNGDRRLAKRYGKDFEMVKGRTSIVPFAAILDGRQRLPQDFYKEFIRLPYLTITALTLGAYFAHPLMQASSFNLHW* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03694 358 PANTHER 15-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTIC 27 358 - -
Rops11g03694 358 Pfam NnrU protein 130 349 IPR009915 -
Rops11g03694 358 Gene3D - 124 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03694 Rops-Chr11 70462410 70465333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03694 K15744 - gmx:100820507 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03694 11 70462410 70465333 Rops11g03694 11 70462410 70465333 ECH