Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03688 ATGCCCATCTTCTCTGCAACGCTCAGCTCCTTCACTTCCATCTCCTTCCTCTCACCTTCACAATCACAACCCGACCCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTTCCTCAATCCTTTCACTTTCCCAAAATGCCCCCACAACAAGTTAACCGTAAAAACACCACCTTGGCAATGGCATCATCATCACACCGCTAAAATCTTCGTCTCTGGCAATACCCACATTGATCAAAATCCCGACCCTTTAATTCTTCAACGCCCTTCTGCTCCAGACTCACTAGATGCCGCTCGTCAGGCTCGGATATCGTCAGATTGGAAGGCTGCAAAGGCATACAAAGAAAGTGGACTCCTTTATAATGGTAGGGTTGAAGGTTTTAATGGTGGGGGCCTGCTGGTTCGGTTTTATTCTATTTTGGGGTTTCTCCCATACCCACAGTTGAGCCCATTGCATGCATGTAAAGAACCAGGGAAAACTATCCAAGAAATTGCAAAAGGCTTATTTGGTTCAATCATATCGGTAAAGGTAATTCTAGCGGATGAGGATAACAAGAAATTGATCGTCTCTGAAAAGGAAGCTGCCTGGACTAAATATTCAAAACAGGTCAAGTTGGGGGACATTTTTGATGCAAGAGTTGGTTATGTTGAGGACTATGGTGCTTTTATTCATTTGTGCTTCCCTGACGGTCTTTATCACCTTACTGGACTAGTACACATCTCAGAAGTGTCATGGGATCTGGTTCAAGATGTGAGAGATTTCTTAAAAGAAGGTGATGAAGTGAGGGTCAAAGTTATCGGTATTGATAGTGTAAAGTCAAGGATTAACCTATCAATTAAACAGCTAGAGGAAGATCCACTTCTAGAAACTCTGGACAAAGTAATACCTCAGGATGGTTTAGCTGATCCTGATTCTTTGAGCGGTAGTGATGGCAGTGGCATTGAGCCCCTTCCAGGACTTGAAACAATCCTTGAAGAGCTACAACAGGAAGATGGGATAAATGATGCAAGAATCAGCCGTCAGGGGTTTGAAAAACGAGTGGTCTCACAAGACTTGCAGCTTTGGCTTTCTAATGCACCTCCAACGAACCAAAGGTTTACTCTCCTAGCTCGGGCTGGAAGACAGGTGCAGGAGATACTTCTGACTACATCCCTTGATCAAGAAGGTATCAAAAAGGCATTACAACGAGTTTTGGAGCGTGTCCCCTGA 1203 0.4406 MPIFSATLSSFTSISFLSPSQSQPDPSSSSSSSSPFLNPFTFPKCPHNKLTVKTPPWQWHHHHTAKIFVSGNTHIDQNPDPLILQRPSAPDSLDAARQARISSDWKAAKAYKESGLLYNGRVEGFNGGGLLVRFYSILGFLPYPQLSPLHACKEPGKTIQEIAKGLFGSIISVKVILADEDNKKLIVSEKEAAWTKYSKQVKLGDIFDARVGYVEDYGAFIHLCFPDGLYHLTGLVHISEVSWDLVQDVRDFLKEGDEVRVKVIGIDSVKSRINLSIKQLEEDPLLETLDKVIPQDGLADPDSLSGSDGSGIEPLPGLETILEELQQEDGINDARISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLLARAGRQVQEILLTTSLDQEGIKKALQRVLERVP* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03688 400 PANTHER OS03G0844900 PROTEIN 27 400 - -
Rops11g03688 400 SMART S1_6 113 190 IPR022967 -
Rops11g03688 400 SMART S1_6 202 278 IPR022967 -
Rops11g03688 400 ProSiteProfiles S1 domain profile. 204 278 IPR003029 GO:0003676
Rops11g03688 400 SUPERFAMILY Nucleic acid-binding proteins 115 190 IPR012340 -
Rops11g03688 400 ProSiteProfiles S1 domain profile. 115 190 IPR003029 GO:0003676
Rops11g03688 400 Gene3D - 105 194 IPR012340 -
Rops11g03688 400 Gene3D - 195 290 IPR012340 -
Rops11g03688 400 Pfam S1 RNA binding domain 202 278 IPR003029 GO:0003676
Rops11g03688 400 SUPERFAMILY Nucleic acid-binding proteins 190 283 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03688 - - gmx:100798303 557.37