Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03671 ATGGTGTCCTTTTGCCCTGTTATCTCTCACTCCTTCTCCTGCATTTCCTTTCCATTTCCAAACACTTCACACTTTGTACTTCGTAACCACACCGTTCAATCTCAATTCCCTACTTTCCCACTCTCCCGCCACCATTCACATTCCCTAAGAAAGGGTGTTAGTTTACGATGGGGGAGGGAGTCAACAAGTACCAAGATATGTGCTTCAGTTACAGATATTGCTGTGGATGTATCTGTGGAGGAAAAACAGCTTCAACTTCCAAAAGGAGAAACTTGGTCAGTTCATAAGTTTGGTGGAACATGTGTGGGAAGTTCAGTGAGAATAAAAAATGTTGCAGAGGTAATTATTAAAGATGATTCGGAGAGGAAATTGGTGGTGGTTTCTGCTATGTCAAAGGTGACAGATATGATGTATGATCTCATCAACAAGGCTCAATCTCGTGATGAGTCTTACATATCTGCACTGAATGCTGTTTTAGAGAAGCATAGCTCAACTGCACATGACCTTCTTGATGGAGATGATCTTGCTACTTTCTTATCACGGTTGCATCAAGATATCAGTAACCTTAAGGCAATGCTTCAAGCCATATACATAGCTGGTCATGCAACACAATCCTTTACTGACTTTGTTGTGGGACACGGGGAGTTATGGTCTGCACAGATGTTGTCTTATGTTATTAGGAAGAATGGAATTGACAGCAAATGGATGGATACAAGGGAAGTCCTTATTGTAAATCCTACTCGTTCTGATCAAGTTGATCCTGACTACTTGGAATCTGAAAAAAGACTTGAGAAATGGTATTCTCTGAATCCAGCTAAGGTGATCATTGCCACTGGATTCATAGCAAGCACACCTCAAAATATTCCTACTACTCTCAAGAGAGATGGAAGTGACTTCTCAGCAGCAATTATGGGTGCTCTCTTCAGAGCTCGTCAGGTCACAATTTGGACAGATGTTGATGGTGTGTATAGTGCAGATCCTAGAAAAGTTAGTGATGCTGTGATTTTGAAGACTTTGTCTTATCAAGAGGCATGGGAAATGTCTTATTTTGGTGCAAATGTCTTACATCCACGCACAATAATTCCAGTTATACGGTATGGCATACCCATTATAATAAGGAATATCTTCAACACCTCTGCTTCTGGAACAAAGATCTGCCATCCTTCTATTCTTAATGATGAAGATAGGCAGATATTAAAAAATTATGTCAAAGGCTTTACAACAATAGACAACTTGGCACTTGTAAACGTAGAGGGAACTGGAATGGCTGGTGTTCCAGGTACAGCCAGTGCTATTTTTGCTGCAGTAAAAGAAGTTGGAGCTAATGTTATTATGATATCTCAGGCTAGTAGTGAGCATTCTGTGTGCTTTGCTGTGCCTGAGAAGGAAGTAAAAGCTGTTGCTCAGGCTTTGCAGTCTATATTTCATAATGCTTTAGGTGCTGGGCGTCTTTCTCAGGTTGCGATCATTCCAAATTGCAGTATTTTAGCAGCTGTTGGCCAGAAAATGGCAAGTACTCCTGGAGTTAGTGCCACCCTTTTCAATGCATTGGCTCAGGCCAACATAAATATCCGTGCAATAGCACAAGGTTGTTCCGAGTACAATATAACGGTGGTTGTTAAGAGAGAGGATTCTATAAAGGCTTTAAGGGCTGTACATTCAAGATTTTATCTGTCACGAACCACCATAGCAATGGGCATTATTGGACCTGGATTAATTGGAAGCACACTACTTGACCAGCTAAGGGATCAGGCAGCAATTCTGAAAGAAGAATTAAACATAGATTTGCGTGTCATGGGCATCACAGGTTCAAAGTTGATGGTCCTTGATGATGCGGGCATCAACTTGGTTAAGTGGAGAGAGGTTCGAGAGGAAAAAGGAGAAGTGGCTAATATGGAAAAATTTGTTGAACATGTGCATGGAAATCATTTTATACCAAACACTGTGATAGTGGACTGCACAGCTGACTCTGTCATAGCAAGCCATTACGATGATTGGCTGCGTAAAGGAATACATATAATCACCCCAAATAAGAAGGCTAATTCAGGGCCACTTAATCAGTATTTGAAGTTAAGAGCTCTTCAGAGGCAATCATACACACATTACTTCTATGAAGCTACTGTTGGAGCTGGTCTTCCAATTATCAGCACTTTAAGGGGCCTTCTTGAAACTGGTGACAAAATATTGCAAATTGAAGGCATCTTCAGTGGGACTTTGAGTTACATCTTTAATAACTTCAAAGATGGCCGGGTTTTTAGTGAGGTAGTTACTGAAGCAAAGGAAGCAGGTTACACTGAGCCAGATCCAAGGGATGATCTGTCTGGAACTGATGTTGCTAGAAAGGTTATAATTCTTGCAAGGGAATCTGGCCTAAAGCTAGAGCTTTCTGATATTCCTGTTGAAAATCTTGTGCCAGAACCATTAAGAGCTAGTGCATCAGCTCAAGAATTTATGCAACAATTACCAAAATTTGACCAGGAGTTAACAAGGAAACAAGAAGATGCAGAGAGTGCTGGGGAAGTGTTGAGATATGTGGGAGTGGTTGATGTGACTAATCAAAAGGGGGTGGTAGAGCTGCGAAGATACAAGAAGGATCATCCATTTGCACAACTATCTGGGTCAGATAACATTATTGCATTCACAACAAGAAGGTATAAGAATCAGCCATTGATAGTTCGTGGACCAGGAGCTGGTGCCCAAGTCACAGCTGGAGGAATATTCAGTGACATTTTACAACTTGCTTCTTATCTTGGTGCCCCATCATAG 2766 0.4121 MVSFCPVISHSFSCISFPFPNTSHFVLRNHTVQSQFPTFPLSRHHSHSLRKGVSLRWGRESTSTKICASVTDIAVDVSVEEKQLQLPKGETWSVHKFGGTCVGSSVRIKNVAEVIIKDDSERKLVVVSAMSKVTDMMYDLINKAQSRDESYISALNAVLEKHSSTAHDLLDGDDLATFLSRLHQDISNLKAMLQAIYIAGHATQSFTDFVVGHGELWSAQMLSYVIRKNGIDSKWMDTREVLIVNPTRSDQVDPDYLESEKRLEKWYSLNPAKVIIATGFIASTPQNIPTTLKRDGSDFSAAIMGALFRARQVTIWTDVDGVYSADPRKVSDAVILKTLSYQEAWEMSYFGANVLHPRTIIPVIRYGIPIIIRNIFNTSASGTKICHPSILNDEDRQILKNYVKGFTTIDNLALVNVEGTGMAGVPGTASAIFAAVKEVGANVIMISQASSEHSVCFAVPEKEVKAVAQALQSIFHNALGAGRLSQVAIIPNCSILAAVGQKMASTPGVSATLFNALAQANINIRAIAQGCSEYNITVVVKREDSIKALRAVHSRFYLSRTTIAMGIIGPGLIGSTLLDQLRDQAAILKEELNIDLRVMGITGSKLMVLDDAGINLVKWREVREEKGEVANMEKFVEHVHGNHFIPNTVIVDCTADSVIASHYDDWLRKGIHIITPNKKANSGPLNQYLKLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILQIEGIFSGTLSYIFNNFKDGRVFSEVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVENLVPEPLRASASAQEFMQQLPKFDQELTRKQEDAESAGEVLRYVGVVDVTNQKGVVELRRYKKDHPFAQLSGSDNIIAFTTRRYKNQPLIVRGPGAGAQVTAGGIFSDILQLASYLGAPS* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03671 921 Pfam ACT domain 421 475 IPR002912 -
Rops11g03671 921 Gene3D - 92 388 IPR036393 -
Rops11g03671 921 Gene3D - 399 558 - -
Rops11g03671 921 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 561 735 IPR036291 -
Rops11g03671 921 Pfam Amino acid kinase family 93 374 IPR001048 -
Rops11g03671 921 Pfam Homoserine dehydrogenase, NAD binding domain 569 705 IPR005106 GO:0016491|GO:0050661
Rops11g03671 921 CDD AAK_AK-HSDH 92 386 IPR041743 -
Rops11g03671 921 Pfam Homoserine dehydrogenase 713 911 IPR001342 GO:0006520
Rops11g03671 921 SUPERFAMILY Carbamate kinase-like 93 387 IPR036393 -
Rops11g03671 921 ProSitePatterns Aspartokinase signature. 94 102 IPR018042 GO:0004072|GO:0008652
Rops11g03671 921 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 564 740 - -
Rops11g03671 921 ProSiteProfiles ACT domain profile. 498 575 IPR002912 -
Rops11g03671 921 Gene3D Dihydrodipicolinate Reductase; domain 2 724 895 - -
Rops11g03671 921 PANTHER - 76 921 IPR011147 GO:0004072|GO:0004412|GO:0009067
Rops11g03671 921 SUPERFAMILY ACT-like 401 476 IPR045865 -
Rops11g03671 921 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 724 895 - -
Rops11g03671 921 CDD ACT_AKi-HSDH-ThrA_2 493 558 - -
Rops11g03671 921 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 713 898 - -
Rops11g03671 921 CDD ACT_AKi-HSDH-ThrA-like_1 412 491 - -
Rops11g03671 921 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 400 558 - -
Rops11g03671 921 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 91 388 - -
Rops11g03671 921 SUPERFAMILY ACT-like 484 572 IPR045865 -
Rops11g03671 921 Gene3D - 564 913 - -
Rops11g03671 921 ProSitePatterns Homoserine dehydrogenase signature. 759 781 IPR019811 GO:0006520
Rops11g03671 921 NCBIfam aspartate kinase 92 556 IPR001341 GO:0004072|GO:0008652
Rops11g03671 921 ProSiteProfiles ACT domain profile. 417 486 IPR002912 -
Rops11g03671 921 Pfam ACT domain 491 554 IPR027795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03671 Rops-Chr11 70253239 70261878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03671 K12524 - gmx:548017 1510.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03671 11 70253239 70261878 Rops11g03671 11 70253239 70261878 ECH