Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03670 ATGTCTGCGATTCCTATTACCTCATACTATGCTTCCACCTTCTCCTATTCTGTACAAGCGCTTCCTCTCTTCTTTGCAAGCCACAACTTCAACAGAATCAAAGTTTACCGACCTTGTTCTTTTCGTGTGTTTTGCCAATCTGAATCCAAGACAGAGATAACGCAGATAAGAAGGTGCTCCCCTTTTCTAGAAAGTTCATTACTTTCTGGTAAGGGTGCTGGGGCCTCAGATGAGTGGAAAGCAGTTCCTGACATTTGGAGATCTTCTGCAGAGAAGTATGGTGATAAAGTCGCCTTAGTAGATCCATATCATGATCCTCCTTCAACTATGACATACAAACAGTTGGAGGATGCAATATTGGACTTTGCTGAGGGCTTGAGAGTTATTGGAATAAGACCCGATGAGAAGCTTGCACTTTTTGCTGATAATTCATGTCGCTGGCTTGTAGCAGATCAAGGTATGATGGCAAGTGGAGCAATCAATGTGGTAAGGGGTTCAAGGTCATCAATTGAAGAATTGCTGCAAATATACAACCACTCTGAAAGTGTTGCGCTAGCTGTGGACAATCCTGAAATGTTCAATCGAATTGCAAAAGTGTTTTATTTGAAGACTTCCATGAGATTTATCATCCTGATTTGGGGAGAAAAATCATCCCTGGTCAGCGAAGGAAATGAGGAGGTGCCAGTCTTTACTTTCATGGAAGTCGTACAATTGGGACGAGAGAGTCGCAAGGCATTGTTTGATTCTCATGATGCTAGGCAGCACTATATGTATGAAGCAATAAAATCTGATGACATTGCTACACTTGTATACACTAGTGGAACTACGGGAAATCCAAAAGGTGTTATGCTAACCCATCGGAATCTTTTGCATCAGATTAAAAACTTATGGGACATTGTACCTGCTGAAGTTGGGGATAGATTTCTAAGCATGCTGCCTCCTTGGCATGCATATGAAAGAGCTAGTGAGTATTTCATTTTCTCATGTGGTGTTGAACAAGTATACACTACCGTGAGAAACTTGAAGGATGACTTGGGACGTTATAAGCCACATTACTTGATTTCTGTTCCTTTAGTTTATGAAACATTATACAGTGGGATCCAGAAGCAGATATCTACAAGCTCCCTAGTTAGAAAGCTTGTCGCACTTGCATTCATAAGGGTCAGCTTAGGGTACATGGAGTGTAAGCGGATTTATGAGGGTAAATGTCTAATAAAGAATCAGAAGTCACCTTCCTATCTCTATTCAATGTTGGACTGGTTATGGGCAAGAGTTATTGCCACAATATTATTTCCAGTTCATATGCTGGCAAAGAAACTGGTCTACAGTAAAATCCATTCAGCTATTGGAATATCAAAGGCTGGAATAAGTGGTGGTAGCAGCTTATCTTCTCATGTCGATAAATTTTTTGAGGCTATTGGAGTGACCGTGCAGAATGGATATGGTTTAACAGAAACTTCACCAGTTATTGCTGCTCGACGACTTAGTTATAATGTTATTGGATCTGTTGGGCATCTACTTAAGCATACAGAATTCAAAGTTGTAGATTCAGAAACTGATGAAGTTCTTCCACCTGGTTCAAAGGGAATTTTGAAAGTCAGGGGCCCACAAATGATGAAGGGATACTACAAGAATCCTTCAGCTACAAATCAGGTCTTAGATAGGGATGGCTGGCTGAATACTGGTGATATAGGTTGGATTGTTCCCCACCATTCAACTGGGCGGAGTCGTAATTCTGGCGGTGTGATTGTTGTGGAAGGCCGTGCTAAAGACACTATTGTGCTTTCAACAGGCGAAAATGTTGAACCGGGAGAACTTGAAGAAGCTGCCACGAGGAGTAGCCTCATACAACAAATCGTTGTCATTGGCCAGGATAAGCGACGTTTAGGAGCTGTAATTGTTCCTAACAAAGAAGAAGTCTTAAAGGCAGCAAGGGAATTGTCGATTATAGATTCCAATAGTTCAGATGTCAGTCAGGAAAAAGTGACCAGCCTAATATATAAAGAATTGAAGACCTGGACGTCAGAGTCAACATTTCAAATTGGGCCAATCCTCCTCGTAAATGATCCCTTCACGATTGATAATGGGCTAATGACACCCACCATGAAAATTCGAAGGGATAGAGTTATGGCTCAATACAAGGACCAAATAGATAATCTATACAAGTAA 2169 0.4117 MSAIPITSYYASTFSYSVQALPLFFASHNFNRIKVYRPCSFRVFCQSESKTEITQIRRCSPFLESSLLSGKGAGASDEWKAVPDIWRSSAEKYGDKVALVDPYHDPPSTMTYKQLEDAILDFAEGLRVIGIRPDEKLALFADNSCRWLVADQGMMASGAINVVRGSRSSIEELLQIYNHSESVALAVDNPEMFNRIAKVFYLKTSMRFIILIWGEKSSLVSEGNEEVPVFTFMEVVQLGRESRKALFDSHDARQHYMYEAIKSDDIATLVYTSGTTGNPKGVMLTHRNLLHQIKNLWDIVPAEVGDRFLSMLPPWHAYERASEYFIFSCGVEQVYTTVRNLKDDLGRYKPHYLISVPLVYETLYSGIQKQISTSSLVRKLVALAFIRVSLGYMECKRIYEGKCLIKNQKSPSYLYSMLDWLWARVIATILFPVHMLAKKLVYSKIHSAIGISKAGISGGSSLSSHVDKFFEAIGVTVQNGYGLTETSPVIAARRLSYNVIGSVGHLLKHTEFKVVDSETDEVLPPGSKGILKVRGPQMMKGYYKNPSATNQVLDRDGWLNTGDIGWIVPHHSTGRSRNSGGVIVVEGRAKDTIVLSTGENVEPGELEEAATRSSLIQQIVVIGQDKRRLGAVIVPNKEEVLKAARELSIIDSNSSDVSQEKVTSLIYKELKTWTSESTFQIGPILLVNDPFTIDNGLMTPTMKIRRDRVMAQYKDQIDNLYK* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03670 722 SUPERFAMILY Acetyl-CoA synthetase-like 80 721 - -
Rops11g03670 722 ProSitePatterns Putative AMP-binding domain signature. 269 280 IPR020845 -
Rops11g03670 722 Gene3D - 590 720 IPR045851 -
Rops11g03670 722 Gene3D - 73 575 IPR042099 -
Rops11g03670 722 Pfam AMP-binding enzyme 88 595 IPR000873 -
Rops11g03670 722 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 40 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03670 Rops-Chr11 70229688 70241271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03670 1 722 Acyl Lipid Metabolism Gene Families AT3G23790 67.220 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03670 K01897 - gmx:100782583 1237.25