Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03654 ATGGCTTCACCACCAGACACGAGCAAAACCATGAAGCTGGAGCGTTACAACAGTTACATCCGGAGAGTGAACAGCACCAAGCTCCTAAACGCGTCGTCTAAAATTCTTTTCCGTGCCACGCTCCTTGTAGCTCTCGTCCTCGTATTCCTCTTCACTTTCAACTACGCTCCTCTCTCCGACAACCACCACATCCATAATCATAATCACTTCCTCTCCTCCGCATTCGGCGGCGGCGCTGCCTGGGAGAAGCAAGTGCGGCACTCCTCCACCCCTCGCCGTCACAACGGAATGTCAGTTCTGGTCACCGGAGCCGCCGGATTCGTCGGGAGTCACTGTTCACTCGCCCTGAAAAAACGCGGCGACGGTGTTTTAGGATTTGACAATTTCAACAGTTACTACGACACGTCGTTGAAGCGTGCGAGACAATCATTATTATCAAAGCACCAAGTGTTTATAGTTGAAGGTGACCTAAACGACACGCCGTTGCTGTCTAAACTCTTCGACGTGGTGCCGTTTACTCACGTCCTCCACTTAGCGGCACAAGCCGGTGTTCGTTACGCCATGCAGAACCCGCAATCTTACGTGCAATCCAACATTGCAGGCTTCGTGAACCTTCTAGAAGTTGCCAAAGCCGCAAACCCTCAACCTTCTATTGTCTGGGCCTCATCAAGCTCCGTTTACGGCCTCAACACCGAGAATCCCTTCTCGGAGCTCCACCGGACGGATCGTCCGGCGAGTCTCTACGCCGCAACCAAAAAAGCCGGCGAGGAAATCGCGCATACCTATAACCATATCTACGGTCTTTCCCTGACAGGGCTCCGATTCTTCACCGTTTACGGCCCATGGGGGAGACCTGACATGGCTTATTTCTTCTTCACGAAGGACATCCTTCAAGGGAAGAACATCGATGTTTACCAGACACAAGACGGGAAGGAGGTGGCGCGTGACTTCACTTACATCGACGACATCGTTAAAGGATGCATCGGAGCGTTGGACACGGCGGAGAAGAGCACCGGAAGAGGCGGAAAGAAGCGTGGTCCGGCTCAGTTGAGGGTTTACAATCTGGGCAACACATCGCCGGTGCCGGTGGGGAAGTTGGTTTCAATTTTAGAAGGTTTGTTAAACACAAAGGCCAAAAAGCATGTCATAAAAATGCCACGAAACGGTGACGTTCCGTACACGCACGCTAACGTGACCTTGGCTTACAAAGACTTTGGATACAAACCCACCACGGATCTTGCCACGGGACTCAGGAAGTTCGTGAAGTGGTACGTAAGTTATTACGGGATTCAGTCGAGGCTAAAAAGGGAAAATCACATTGACACCGAGGATTCCGCTTGA 1341 0.5175 MASPPDTSKTMKLERYNSYIRRVNSTKLLNASSKILFRATLLVALVLVFLFTFNYAPLSDNHHIHNHNHFLSSAFGGGAAWEKQVRHSSTPRRHNGMSVLVTGAAGFVGSHCSLALKKRGDGVLGFDNFNSYYDTSLKRARQSLLSKHQVFIVEGDLNDTPLLSKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVQSNIAGFVNLLEVAKAANPQPSIVWASSSSVYGLNTENPFSELHRTDRPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILQGKNIDVYQTQDGKEVARDFTYIDDIVKGCIGALDTAEKSTGRGGKKRGPAQLRVYNLGNTSPVPVGKLVSILEGLLNTKAKKHVIKMPRNGDVPYTHANVTLAYKDFGYKPTTDLATGLRKFVKWYVSYYGIQSRLKRENHIDTEDSA* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03654 446 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 91 430 IPR036291 -
Rops11g03654 446 Gene3D - 276 424 - -
Rops11g03654 446 PANTHER EPIMERASE-RELATED 81 431 - -
Rops11g03654 446 Gene3D - 100 411 - -
Rops11g03654 446 PRINTS Nucleotide sugar epimerase signature 125 141 - -
Rops11g03654 446 PRINTS Nucleotide sugar epimerase signature 350 365 - -
Rops11g03654 446 PRINTS Nucleotide sugar epimerase signature 390 407 - -
Rops11g03654 446 PRINTS Nucleotide sugar epimerase signature 315 330 - -
Rops11g03654 446 Pfam GDP-mannose 4,6 dehydratase 100 419 IPR016040 -
Rops11g03654 446 FunFam UDP-glucuronate 4-epimerase 3 98 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03654 Rops-Chr11 70075244 70077052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03654 1 446 Miscellaneous Gene Families AT3G23820 81.046 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03654 K08679 - zju:107422361 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03654 11 70075244 70077052 Rops11g03654 11 70075244 70077052 ECH