Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03643 ATGGGCTCGGTTTTGGTGCCTCCCATTGTTACATTGAGTCTGTTGTTTTCACTGAGTTTAGTCTGTATTCATGGAGGAGTTCCAACCACACTGGATGGACCCTTCAAGCCTGTGACTGTTCCTCTTGACCAGAGCTTCCGTGGACACGCTGTGGACCTGCCAGACTCAGATCCTCTGGTTCAACGAACTGTGGAAGGGTTTGAACCTGAACAAATCTCTGTCTCCCTCTCTACATCTCATAACTCTGTTTGGATTTCTTGGATTACAGGGGAGTTCCATATTGGGGACAATATAGAACCCTTAGATCCTGAAACTGTTGCTAGCATAGTTCAATATGGAAGGTACGGAAGGTCCATGAGTCACCAAGCTGTGGGTTATTCCCTTGTTTATAATCAACTTTATCCTTTTGAAGGCCTTCAGAACTACACTTCTGGAATTATACATCATGTTCGTCTCACAGGATTGAAACCCAACACACTATATCAATATCAATGTGGGGATCCTTCTTTGTCAGCAATGAGTGATGTTCATTATTTCAGGACCATGCCAGTTTCAGGCCCCAAGAGCTACCCTAGCAGAATAGCAGTGGTTGGAGACTTGGGTCTTACATATAATACCACATCCACTGTCAATCATATGATCAGTAATCATCCTGATCTTATTCTATTGGTTGGAGATGTTAGTTATGCTAACTTGTATCTTACTAATGGTACTGGGTCAGACTGCTATTCTTGCTCATTTTCTAATACTCCCATCCATGAAACATATCAGCCTCGTTGGGATTATTGGGGAAGGTACATGCAGCCTCTGATTTCTAGTGTCCCAATAATGGTAATAGAAGGGAATCATGAGATAGAAGAACAAGCTGAAAACAATATATTTGTTGCCTATAGTTCTCGATTTGCATTCCCATCGGAAGAGAGTGGATCATTATCAACTTTGTATTATTCTTTCAATGCTGGAGGCATACATTTTATAATGCTTGGGGCCTACATATCGTATAACAAATCAGGGGACCAGTACAAGTGGTTGGAGAGAGACATGGCTTCTGTTGACAGGGAAGTAACTCCATGGTTGGTAGCTACATGGCATCCACCTTGGTACAGCACCTACCAGTCACATTATAGAGAAGCAGAGTGTATGAGGGTGGAGATGGAAGACTTGCTATATAAATATGGTGTTGACATTGTCTTCAATGGACATGTTCATGCCTATGAGAGATCAAACCGTGTATATAATTACACATTGGATCCCTGTGGCCCTGTTTATATCACGGTTGGTGATGGTGGTAACAGGGAAAAGATGGCAATTACACATGCTGATGAACCTGGAAACTGTCCAGAACCATCAACCACACCAGATGACTTTATGGGTGGCTTCTGTGCCTTTAACTTTACATCTGGTCCAGCAGCAGGTAAGTTCTGTTGGGATCGACAGCCTGATTATAGTGCTTTCAGAGAAAGTAGCTTCGGTCATGGGATTCTAGAGGTGAAAAATGAAACTCATGCCTTGTGGAGTTGGCATCGAAACCAAGATTTCTATGGTAGCGCTGGAGATGAGATTTACATTGTTAGGGAGCCTGAGAGGTGTCCACCAGTCAAGCTTTAA 1608 0.4291 MGSVLVPPIVTLSLLFSLSLVCIHGGVPTTLDGPFKPVTVPLDQSFRGHAVDLPDSDPLVQRTVEGFEPEQISVSLSTSHNSVWISWITGEFHIGDNIEPLDPETVASIVQYGRYGRSMSHQAVGYSLVYNQLYPFEGLQNYTSGIIHHVRLTGLKPNTLYQYQCGDPSLSAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGLTYNTTSTVNHMISNHPDLILLVGDVSYANLYLTNGTGSDCYSCSFSNTPIHETYQPRWDYWGRYMQPLISSVPIMVIEGNHEIEEQAENNIFVAYSSRFAFPSEESGSLSTLYYSFNAGGIHFIMLGAYISYNKSGDQYKWLERDMASVDREVTPWLVATWHPPWYSTYQSHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEPGNCPEPSTTPDDFMGGFCAFNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETHALWSWHRNQDFYGSAGDEIYIVREPERCPPVKL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03643 535 Pfam Calcineurin-like phosphoesterase 193 405 IPR004843 GO:0016787
Rops11g03643 535 PANTHER ACID PHOSPHATASE RELATED 17 526 IPR039331 GO:0003993
Rops11g03643 535 CDD MPP_PAPs 188 525 IPR041792 -
Rops11g03643 535 Gene3D - 68 184 - -
Rops11g03643 535 SUPERFAMILY Purple acid phosphatase, N-terminal domain 47 183 IPR008963 GO:0003993|GO:0046872
Rops11g03643 535 Pfam Purple acid Phosphatase, N-terminal domain 69 181 IPR015914 GO:0003993|GO:0046872
Rops11g03643 535 FunFam Purple acid phosphatase 188 450 - -
Rops11g03643 535 Gene3D - 461 528 IPR029052 -
Rops11g03643 535 Gene3D - 187 457 IPR029052 -
Rops11g03643 535 Pfam Iron/zinc purple acid phosphatase-like protein C 420 512 IPR025733 -
Rops11g03643 535 SUPERFAMILY Metallo-dependent phosphatases 193 514 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03643 Rops-Chr11 69641793 69647127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03643 69 430 Miscellaneous Gene Families AT1G13900 25.060 2.12e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03643 K22390 - gmx:100784006 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03643 11 69641793 69647127 Rops11g03643 11 69641793 69647127 ECH