Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03623 ATGGGTCGCAGGGTGATGTTAGCTTTGATGCTATGCCTCTTTGCTGCGGCAGTGCAAGGTGAAGACCCTTACTTGTTCTACACATGGAATGTCACATATGGCACTATTTCTCCTCTTGGAGTTCCCCAGCAAGGTATTCTTATCAATGGTCAATTCCCTGGACCCGAAATCAATTCCACCAGCAACAACAACATCGTTTTGAATGTGTTCAACAACCTTGATGAGCCACTCCTTTTCACCTGGCATGGTGTTCAACAAAGGAAGAACTCATGGCAAGATGGTACACCTGGAACCTCATGCCCCATCCTTCCAGGGACAAACTACACTTACCATTTCCAAGTGAAGGACCAAATTGGAAGCTATTTCTACTATCCCACCACAGCCATGCATAGGGCAGCTGGTGGTTTTGGTGGCCTTAGGATCTTCAGTCGTTTGTTGATCCCTGTCCCTTATGCTGATCCTGAGGATGAGTACTGGGTTATCATTGGTGACTGGTTCACCAAGAGCCACACCACTCTCAAGAAGTTATTGGACAGTGGTCGCTCTATTGGAAGGCCAGATGGTGTTCTCATCAATGGCAAAACCGCCAAGGGTGATGGCAGTGATGAACCACTCTACACCATGAAGCCTGGAAAAACCTACAAGTACAGAATCTGCAATGTTGGTCTCAAAGATGCCTTGAACTTCAGGATCCAAGGTCATCCCATGAAGCTTGTAGAAACTGAAGGCTCCCATGTCGTGCAAAACAGCTACGACTCCCTTGATGTTCATGTTGGACAATGCTACACTGTTCTTGTCACTGCTGACAAAGAACCAAAGGACTATTACATGGTAGCTTCAACTCGTTTCACCAAGTACATGCTTACTGGTAAAGGCATCATCCGTTACACCAATGGTGTTGGCCCTGCTTCACCTGAACTCCCTGAGGCACCTGTTGGTTGGGCTTGGTCTTTGAATCAGTTCAGATCCTTCCGTTGGAACCTCACTGCTAGTGCTGCTAGGCCTAACCCTCAGGGTTCGTACCATTATGGTCAGATCAACATTACTCGCACTATCAAGTTGGTTAACACTGTTAGCAGAACTTCTGGCCTTCGTTATGCCCTTAATGGTGTCTCCCATGTTGATGGTGAAACTCCTCTTAAGCTAGCTGAGTACTATGGAGTTGCTGACAAGGTTTTCAAGTACAACATCATCTCTGATGAACCCCCGGTTGATCTGAAATCCGTCACTGTTGCACCAAATGTTGTTAATGCCACATTCCGTGACTTCATCGAGATCATCCTTGAGAACCCTGGAAAAACTGTCCAGTCATACAATTTAGATGGTTACTCATTCTTTGCAGTCGCCATTGAGCCAGGCAAATGGAGCCCAGAGAAGAGGAAGAACTATAACCTTCTTGATGCTGTGAGCAGACACACCATTCAGGTCTTTCCCAAATCTTGGGCTGCAATCATGTTGACATTCGACAATGCTGGAATGTGGAACCTGAGATCTGAGCATGCTGAGAACCGTTACTTGGGCCAACAGCTCTACGTTAGTGTTTTGTCCCCTGAACATTCCTTAAGGGATGAGTACAACCTTCCAGAAACCCAGCTTCTTTGCGGTATCGTCAAGGATTTGCCAAAGCCAGAACCATACTCCATCTAG 1647 0.4657 MGRRVMLALMLCLFAAAVQGEDPYLFYTWNVTYGTISPLGVPQQGILINGQFPGPEINSTSNNNIVLNVFNNLDEPLLFTWHGVQQRKNSWQDGTPGTSCPILPGTNYTYHFQVKDQIGSYFYYPTTAMHRAAGGFGGLRIFSRLLIPVPYADPEDEYWVIIGDWFTKSHTTLKKLLDSGRSIGRPDGVLINGKTAKGDGSDEPLYTMKPGKTYKYRICNVGLKDALNFRIQGHPMKLVETEGSHVVQNSYDSLDVHVGQCYTVLVTADKEPKDYYMVASTRFTKYMLTGKGIIRYTNGVGPASPELPEAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKLVNTVSRTSGLRYALNGVSHVDGETPLKLAEYYGVADKVFKYNIISDEPPVDLKSVTVAPNVVNATFRDFIEIILENPGKTVQSYNLDGYSFFAVAIEPGKWSPEKRKNYNLLDAVSRHTIQVFPKSWAAIMLTFDNAGMWNLRSEHAENRYLGQQLYVSVLSPEHSLRDEYNLPETQLLCGIVKDLPKPEPYSI* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03623 548 Pfam Multicopper oxidase 399 517 IPR011706 GO:0005507|GO:0016491
Rops11g03623 548 SUPERFAMILY Cupredoxins 153 335 IPR008972 -
Rops11g03623 548 Gene3D - 344 539 IPR008972 -
Rops11g03623 548 SUPERFAMILY Cupredoxins 21 170 IPR008972 -
Rops11g03623 548 Gene3D - 154 334 IPR008972 -
Rops11g03623 548 SUPERFAMILY Cupredoxins 348 534 IPR008972 -
Rops11g03623 548 Gene3D - 15 142 IPR008972 -
Rops11g03623 548 CDD CuRO_1_AAO_like_1 25 141 IPR034273 GO:0005507
Rops11g03623 548 PANTHER MULTI-COPPER OXIDASE 43 513 IPR045087 -
Rops11g03623 548 CDD CuRO_2_AAO_like_1 156 296 IPR034271 -
Rops11g03623 548 Pfam Multicopper oxidase 30 143 IPR011707 GO:0005507
Rops11g03623 548 Pfam Multicopper oxidase 157 297 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03623 Rops-Chr11 69286001 69288048 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03623 K00423 - gmx:100812197 957.977