Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03621 ATGTCTACTTCAACTGCAAAAGCCACTTGGACACCTGCATTCCATAAAATGTTTGTTGATTTATGCCTTGAAGAAACGTTGAAGATGAATGAGCCCAGGACACGTATTTCCAAGGTGGGTTGGAGGAACATTGTTGAATCCTTTTATGCAAAGACTGGTGTGAGATATGACAAAAAACAATTTAAGAATCACTATGATTCAACCAGAAAACTATGGAAAGTCTGGGTTAATTTGACTGGTGATAGTAGCATGAAATGGGATCCAGAAACCAATAAGTTTGGTGCTTCTGAGGAAGACTGGTGCAATTATATAAAGGCAATCCCAGAAGCTGCACAATTTCAGTCTAAGGAAATCCAGTTTAAAGACAAATTGGATATCATCTTTGATTTAGGAATACGAATTGGGGATATTAAAAATTCAACCCTTCTTAAGTGGCAGAATGATGCTTCAGCTACATCTCCTTTGCCTGGAAAAGAGCGAGCGAAGAAACGTAAGAGTGTTGGTAGGGATTGTGAATTAAATAGTCCCATTACAGTTGATTCTATGCCAACTCCAAAAGCCACTTGGACACCTGCATACCATAAAATATTTGTTGATTCATGCCTTGAAGAAACATTGAAGGGGAATAAGTCCGGGACACATTTTACCAAGGAAGGTTGGAGGAATATTGTTGAATCCTTTTATGCTAAGAGTGGTGTGAGATATGACAAAAAACAAATCAAGAATCACTATGATTCAACCAGAAAACTATGGAAAGTCTGGGTTAAGTTGATTGGCGATGGTAGCATGAAATGGGACCCGGAAACCAATACGTTTGGTGCTCCTGAGGAAGACTGGTGCAATTATATTAAGGAAATCCCAGAAGCTGCGCAATTTCGGTATAAGGAAATCCAGTTTTCTGACAAATTGGATATCATCTTTGATGGAAATATGCGAACTGGGGGAATGAGAACTCCAACTAGGCGTAAGAGACAGAATGACGCTTCAGCTACATCTCCTTTGTATGGAAAAGAACGAGAGAAGAAACGTAAGAATGTTGATAGGGATTGTGAATTTAAGAGTGCCATTTTGGTTAATGCTACGCCGATCAGTACGGTTGCAAGTGAGCAAAGCATGTCCAGTTCATCACCTCCCAAGGTCAAAGCCACATGGATTCCTTCAGTGCACAAGATCTTTCTTGATCTATGTCTGCAAGAGACATTAATGGGGAATAAGCCTGGGACACATTTTACCAAGGAAGGTTGGAAGAATATTTTGGAATCATTTTATTTGAAATCTGGTTTGAATTATGATAGATTACAACTTAAGAATCACTGGGATTCTACCAAGGAACAATGGAAAATTTGGTGTAAGCTTATTTGCACTAGTTACATGAAATGGGATCCATCTAACCAGAAATTTGAGGCCAGTGAAGAAGATTGGACCAACTATTTACTGGAAAACCCAGAAGCTGCACAATTTCGCTTTAAGGAACTACAGTTCAGTGACATATTGGAAACCATCTTTAATGGAACTACTGTTACAGGGGAGACTGAACCTGCTGTGCAACAAAGGAAAAGTGATGATAGCGTTGTTACTTTCCCTTTGCATGCAAAAGAACCTGACGCAGCCAACTTAGATGAGAAAAATGAATGTCTTTGTGATGCTGTTGCATCAAGAAATGGTGTGAGTATTCAAACGAAAGCTACCACAATTTCGTCCACTGAAGACAGACGTAATTATAGTATTGGTGAATGCATTGAATGCCTTGATAGAATGGAAGAAATAGAGCAAGGAAGTGATCTCTACTTGTTTGCTTTAGATGTATTCCTTAAGCAGGAATATAGGGAAATTTTTCTGCAATTGAAAAAACCTAATCTGAGGATCTCATGGTTGCAGCGGCTTCAGTCTGTTGGTCAACCTTTACTCTAG 1911 0.3914 MSTSTAKATWTPAFHKMFVDLCLEETLKMNEPRTRISKVGWRNIVESFYAKTGVRYDKKQFKNHYDSTRKLWKVWVNLTGDSSMKWDPETNKFGASEEDWCNYIKAIPEAAQFQSKEIQFKDKLDIIFDLGIRIGDIKNSTLLKWQNDASATSPLPGKERAKKRKSVGRDCELNSPITVDSMPTPKATWTPAYHKIFVDSCLEETLKGNKSGTHFTKEGWRNIVESFYAKSGVRYDKKQIKNHYDSTRKLWKVWVKLIGDGSMKWDPETNTFGAPEEDWCNYIKEIPEAAQFRYKEIQFSDKLDIIFDGNMRTGGMRTPTRRKRQNDASATSPLYGKEREKKRKNVDRDCEFKSAILVNATPISTVASEQSMSSSSPPKVKATWIPSVHKIFLDLCLQETLMGNKPGTHFTKEGWKNILESFYLKSGLNYDRLQLKNHWDSTKEQWKIWCKLICTSYMKWDPSNQKFEASEEDWTNYLLENPEAAQFRFKELQFSDILETIFNGTTVTGETEPAVQQRKSDDSVVTFPLHAKEPDAANLDEKNECLCDAVASRNGVSIQTKATTISSTEDRRNYSIGECIECLDRMEEIEQGSDLYLFALDVFLKQEYREIFLQLKKPNLRISWLQRLQSVGQPLL* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03621 636 MobiDBLite consensus disorder prediction 149 168 - -
Rops11g03621 636 Pfam Myb/SANT-like DNA-binding domain 188 282 IPR024752 -
Rops11g03621 636 Pfam Myb/SANT-like DNA-binding domain 9 103 IPR024752 -
Rops11g03621 636 Pfam Myb/SANT-like DNA-binding domain 383 477 IPR024752 -
Rops11g03621 636 PANTHER - 369 628 IPR045026 -
Rops11g03621 636 MobiDBLite consensus disorder prediction 314 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03621 Rops-Chr11 69270086 69273141 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03621 - - gmx:100793529 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03621 11 69270086 69273141 Rops11g03621 11 69270086 69273141 ECH