Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03578 ATGGAGCAAGAAAATGAGAAGAGAAAGAGAGGAAGAAGAGAAGAAAGTGAAGAAGAGAAATGGGTGCATGATGCATCTGTGGATTATAAAGGCAGAGTTCCTCACCGTGCTTCCACTGGTGTATGGAAAGCTACTCTCTTTGTCCTCATGATTCTGTTTCAATTTGGAGCAGCAATTGAATTCAGTGAAAGGGTAAGCTATTTTGGGATAGGCGCTAATCTTATCTCATACCTGACTAAAGTGATTCATGAAGACCTCAAAACAGCTGCCAAGAATGTCAACTATTGGGCAGGAACAACAACCCTGATGCCTCTTATTGGGGGATTTGTTGCTGATGCCTACACTGGTCGATTTCCTATGGTCCTATTTTCTTCCCTTGTATACCTGATGGGGTTGAGCTTGTTAACTCTGTCTCAATACATCCCAAGTCTAAGGCCATGCAGCACAAGGATATGTCAACGGCCTAGGAAGGTTCTAATTGCAGCCATAAGGAAAAGAAATTTATGCTGTCCTTCAAATCCTGCTTTATTATATGAAGTCCCAAAGTCAGACAAGTCCCAAGGAAGGCTTCTAAGCCATACTATGAGGCTCAGGTTTCTTGACAAGGCAGCAATAACTGAAGAGGAATATGTTGATCAGAAAGACAATCCATGGAGCTTAGCCACAGTGACAAGAGTGGAGGAGACCAAGCTTATTCTGAATATAGTTCCCATATGGCTAACTTCATTAACAACTGGAGTATGTGTAGCACAAGGGTCGACATTCTTTGTCAAACAAGCAGCTGCTATGAACTTAAGCATATGCAACACTTTCAAAATCCCACCAGCTTCTGTTGCCTCTGCTGCAGCTGTTGGTACCTTAGTAGCTGTCCCCATATACGATAAGATCATTGTTCCAATTCTGAGGAAAGTTACTGGCAATGAAAGAGGCATCAGCATCCTAAAGAGGATTGGCATTGGCTTGACATTCTCAGTCATAGTTATGATAGTTGCAGCCTTAGTAGAAGCAAAGAGACTAAGAATGGCTGAACATGAAGTCCTTATAGAAGGGGAAACAAAGCAAAAGACTATGAGTGTGTTATGGTTGATACCCCAATACTTGATCCTTGGCTTTGGGGATTCATTTTCTCTAGTTGGTTTACAAGAGTATTTCTATGACCAAGTTCCTGACTCAATGAGAAGCTTGGGAATGGCTTTATTTCTTAGTGTGATTGGAGTTGGAAGCTTCTTGAGTAGCTTTCTAATTACCATTGTGGACCATGTCACAGGGAAGAATGGCAAAAGTTGGATTGGGAAGGATATAAATTCAAGTCATTTGGATAGATTTTATTGGATGTTGGCATTGATCAATGCTTTAAATCTATGTCTCTATCTCTTTTTGGCAAAGAGATATACTTATAAGACTGTACAGAGAACTGAGAATGGTTGTAAGAATGATGGGGTGGAAATGATGACATGA 1458 0.4088 MEQENEKRKRGRREESEEEKWVHDASVDYKGRVPHRASTGVWKATLFVLMILFQFGAAIEFSERVSYFGIGANLISYLTKVIHEDLKTAAKNVNYWAGTTTLMPLIGGFVADAYTGRFPMVLFSSLVYLMGLSLLTLSQYIPSLRPCSTRICQRPRKVLIAAIRKRNLCCPSNPALLYEVPKSDKSQGRLLSHTMRLRFLDKAAITEEEYVDQKDNPWSLATVTRVEETKLILNIVPIWLTSLTTGVCVAQGSTFFVKQAAAMNLSICNTFKIPPASVASAAAVGTLVAVPIYDKIIVPILRKVTGNERGISILKRIGIGLTFSVIVMIVAALVEAKRLRMAEHEVLIEGETKQKTMSVLWLIPQYLILGFGDSFSLVGLQEYFYDQVPDSMRSLGMALFLSVIGVGSFLSSFLITIVDHVTGKNGKSWIGKDINSSHLDRFYWMLALINALNLCLYLFLAKRYTYKTVQRTENGCKNDGVEMMT* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03578 485 Gene3D MFS general substrate transporter like domains 13 153 IPR036259 -
Rops11g03578 485 SUPERFAMILY MFS general substrate transporter 50 138 IPR036259 -
Rops11g03578 485 Gene3D MFS general substrate transporter like domains 154 474 IPR036259 -
Rops11g03578 485 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 40 152 - -
Rops11g03578 485 SUPERFAMILY MFS general substrate transporter 237 468 IPR036259 -
Rops11g03578 485 Pfam POT family 158 426 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03578 Rops-Chr11 68326572 68330196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03578 157 470 Organic Solute Cotransporters AT3G53960 55.000 4.97e-120 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03578 K26562 - gmx:102660397 502.286