Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03565 ATGAAATCACCAATTAACAGCGATTTTCTCAGAACACCCAATGCCCTAAAAATCGCCGCTTTCTTCTTCATAGCCATCACTTTCTTCTACTTCGGAAAACACTGGTCCGATGGATACCAACAACTCATCTTCTTCACCCAGAGACCCGACCCGGATCCGGATCCGAATGCAGTGGTATCCACTTCCCCGAATTACAACAAATTCTTCAATGTCTCTGCCCTAATCGATCAGAACAACATACAACCCGCGCCGGATAAAACCCTAGCTCCACCGCCGGAGGATTCAATCGAGAAATTCGGGATCGTGAGTGAGAGTGGCACGATGTCGGAGGAATTCGAGGTTGGGAATTTCGATCCAAGGATGGTGGATGATTGGGTTAACGAGACCCAAGTTCAGAATGAGGGTTCTTCTTCTTCTGTTCCCAAATTCGCAATCAAGAAATTTGGGTTATGCCCATTCAACATGATCGAGTATATACCTTGTTTGGATAACGTAGATGCGATTAAGAAGCTTCCTTCAACGGAGAAAGGTGAAAGGTTTGAACGGCATTGCCCAGAAGAAGGGTTGAATTGTTTGGTTCCTGCACCTAAAAGATACCGTGCCCCAATTCCATGGCCCAGAAGCCGAGATGAGGTATGGTATGATAATGTTCCTCACACACGTCTTGTTGAAGATAAAGGTGGTCAAAACTGGATTACTAGGGACAAAGATAAGTTTAAATTTCCAGGAGGTGGTACACAATTTATACATGGGGCAAATGAATACTTGGACCATATTGCTAAGATGATTCCTGAAATTACTTTTGGTAAGCACATACGTGTTGCTCTTGATGTTGGCTGCGGTGTAGCTAGTTTTGGTGCCTACTTACTGTCACGGAATGTCATCACCATGTCTGTTGCCCCCAAGGATGTTCATGAGAATCAGATCCAGTTTGCTCTCGAGCGTGGTGTACCAGCAATGGCGGCAGCATTTGCAACTAGACGTTTATTATATCCTAGTCAAGCTTTTGACTTGATACATTGTTCACGCTGTAGAATTAATTGGACTCGAGATGATGGGATACTACTGCTTGAAGTTAATAGGATGCTAAGAGCAGGAGGGTACTTTGTTTGGGCTGCCCAGCCGGTTTATAAGCATGAGGAAGTTTTAGAAGAACAATGGGAAGAAATGCTTAATCTTACCACTCGACTCTGCTGGAAGTTTTTGAAAAAAGATGGGTACATTGCAGTATGGCAGAAACCTACTGACAATAGCTGCTATCTAAACCGTGAGGCAGGAACTAAACCTCCACTGTGTGACCCAAGTGACGACCCAGACAATGTTTGGTATGTTAATCTAAAAACATGCATCTCTGAATTGCCTAAGAACGGATATGGAGCAAATGTTACTGAATGGCCTGCACGTTTGCAAACCCCACCTGACAGGCTTCAAAGCATAAAAATTGATGCTTTCATATCCAGAAATGAGCTTTCCAAGGCAGAATCAAATTTCTGGAATGAGACAATAACAGGCTATGTTCGTGGTTTTGGCTGGGGCAGCAGGATGAGATTAAGAAATGTTATGGACATGCGAGCAGGTTTTGGAGGATTTGCAGCAGCATTGATTGAGCAGAAACTTGACAGCTGGGTTATGAACGTAGTTCCTGTTAGTGGCCCAAACACCTTGCCTGTTCTATATGACCGTGGATTGATTGGAGTTATGCATGATTGGTGTGAACCATTTGACACCTACCCGAGAACCTATGATTTACTGCATGCAGCAAACCTGCTTTCTGTTGAGAGGAAAAGATGCAATGTCTCATCAATTATGCTCGAGATGGATCGGATACTAAGACCTGGTGGAAGGGTATACATACGTGATTCTCTTTCCATCATGGATGAACTTCAAGAGATTGCCAAGGCTATAGGTTGGCACGTGTCATTGCGTGACACATTTGAGGGGCCTCATGCAAGTTATAGGATCTTGGTTTGTGATAAGCACCTACTAAGAGCTTGA 1995 0.4396 MKSPINSDFLRTPNALKIAAFFFIAITFFYFGKHWSDGYQQLIFFTQRPDPDPDPNAVVSTSPNYNKFFNVSALIDQNNIQPAPDKTLAPPPEDSIEKFGIVSESGTMSEEFEVGNFDPRMVDDWVNETQVQNEGSSSSVPKFAIKKFGLCPFNMIEYIPCLDNVDAIKKLPSTEKGERFERHCPEEGLNCLVPAPKRYRAPIPWPRSRDEVWYDNVPHTRLVEDKGGQNWITRDKDKFKFPGGGTQFIHGANEYLDHIAKMIPEITFGKHIRVALDVGCGVASFGAYLLSRNVITMSVAPKDVHENQIQFALERGVPAMAAAFATRRLLYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEVLEEQWEEMLNLTTRLCWKFLKKDGYIAVWQKPTDNSCYLNREAGTKPPLCDPSDDPDNVWYVNLKTCISELPKNGYGANVTEWPARLQTPPDRLQSIKIDAFISRNELSKAESNFWNETITGYVRGFGWGSRMRLRNVMDMRAGFGGFAAALIEQKLDSWVMNVVPVSGPNTLPVLYDRGLIGVMHDWCEPFDTYPRTYDLLHAANLLSVERKRCNVSSIMLEMDRILRPGGRVYIRDSLSIMDELQEIAKAIGWHVSLRDTFEGPHASYRILVCDKHLLRA* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03565 664 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 130 662 IPR004159 GO:0008168
Rops11g03565 664 Gene3D Vaccinia Virus protein VP39 251 418 IPR029063 -
Rops11g03565 664 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 181 393 IPR029063 -
Rops11g03565 664 FunFam probable methyltransferase PMT3 251 414 - -
Rops11g03565 664 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 516 639 IPR029063 -
Rops11g03565 664 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 157 659 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03565 Rops-Chr11 68083619 68088618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03565 - - gmx:100800414 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03565 11 68083619 68088618 Rops11g03565 11 68083619 68088618 ECH
Rops11g03565 11 68083619 68088618 Rops9g00930 9 15094304 15096958 PCT