Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03555 ATGGTTGGAGCAGGTTATGAAGTGAAGTTACCTGTCATTTGAAACAGTAAAGTGAAGATTGAAGATTTCGATGAAGAACTGTATCAAATTTCTTCAACGTTAACGTTGAATCAAGTAATTAACAGAAGCGACGCAATTTTCCGAATCGAAGAGAGCAACGAATCCTTGCTGTGCCATACAAAGAATATAGCAGAAATGGGACGTCTAAAGCTGCAAGCTGGTATCAATGCAATAGAGGAAGAGGAACCTGAGGAATGTGATGCTTCCTGTCCTAACAGAACAACTTTAGCGTGCATGATCGATTCAGAAATTGGAGCTGTTTTGGCAGTCATGAGAAGAAATGTAAGATGGGGAGGTCGTTATGTATCTGGTGATGATCAACTGGAACACTCTCTCATTCAGTCTTTCAAGACATTGAGGAGACAAATCTTTTCATGGCACAACCATCAGTGGCAAGCTATCAACCCTGCTTTGTATCTACAACCATTTTTAGATGTGATTCGATCCGACGAAACCGGTGCACCAATTACTGGTGTTGCTTTGTCATCTGTTTACAAGATCTTAACTCTCGATGTGATTGATCAAAATACTGCCAATGTTGAGGATGCCATGCACTTGGTGGTTGATGCTGTCACTAGCTGCAGATTTGAGGTCACTGATACTTCTTCAGAAGAAGTTGTTTTAGTGAAGATACTACAAGTTCTCCTTGCATGTATGAAAAGTAAAGCATCTGTAATGCTGAGTAACCAACATGTTTGCACCATAGTGAATACTTGTTTCCGTATAGTTCATCAAGCGGGAGCCAAAGGTGAGTTGTTGCAGCAGATAGCACGGTACACAATGCATGAACTTGTGAGGTGTATTTTCTCTCACCTTCAAGACGTTGACCACACAGACCATGCATTGGTTAATGGAAGCTCTAAGTTGAAACAGGAGACTGGAGGCCTAAATAATGAGTATGCTTTTGGAAGCAGACAATCGGAAAATGGCAGCCTGAGTTCTGAATATGATAATCAGCCATTACCCACAAATTTCGCTCCCAATGCTGCAAGTGTTGTGACAGCAAATGTGATGGATGAAAATACAGCAATCGCTATTAGTGGCAAGGAGGGTGTACCATATGACATGCAACTCATGACTGAACCATATGGTGTTCCTTGCATGGTGGAAATATTTCACTTTTTGTGTTCTTTGCTGAATGTTGTCGAGCATATGGAAATGGGTCCTAGATCAAACACTATTGCATTTGATGAAGATGTACCCCTTTTTGCTTTAACTTTAATTAATTCGGCTATTGAACTTGGAGGGCCATCAATTCGCCGTCACCCAAGGTTGCTGAGCTTAATTCAGGGTGAATTGTTTCATAATCTGATGCAATTTGGTTTGTCAACGAGTCCCCTTATACTTTCAATGGTGTGTAGCATTGTTCTCAATCTGTATCATCATCTTCGTACAGAACTCAAATTACAGCTGGAAGCATTTTTTTCTTGTGTCATTTTGAGACTTGCGCAAAGCAGATATGGGGCTTCATACCAGCAGCAAGAGGTAGCCATGGAGGCCCTTGTCAACTTCTGCAGGCAAAAGACATTTATGGTAGATATGTATGCTAACTTTGATTGTGACATAACTTGCAGTAATGTCTTTGAAGACCTTGCTAATTTGTTGTCAAGAAGTGCATTTCCTGTGAACTGTCCATTGTCTGCCATGCATATTCTAGCTTTGGATGGTCTTATTGCTGTTATACAGGGAATGGCTGAAAGGATAGCCAATGGATCTGTAAGCTCAGAATATTCTCCGGTGAATCTTGAAGAGTATACTCCATTCTGGATGGTTAAATGTGAGAATTATAGTGATCCAAATCATTGGGTTCCTTTTGCCCGCCGAAGAAAGTACATAAAGAGAAGATTGATGATTGGTGCTGACCATTTTAATCGTGATCCTAAGAAAGGTTTAGAGTTTCTCCAAGGAACACATCTTTTACCTGACAAACTTGATCCCCAAAGTGTTGCTTGCTTTTTTAGATACACTGCTGGGTTGGATAAGAATCTTGTTGGTGATTTCCTTGGAAATCATGACGAATTCTGTGTTCAGGTTCTTCATGAATTTGCTGGAACATTTGATTTCCAAGACATGAACTTAGACACAGCCCTGCGTCTATTTTTGGAGACTTTCAGACTGCCTGGAGAATCACAAAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAGTCACCACATATCCTAGCTAACAAGGATGCTGCTCTTGTGTTATCATACTCAATGATAATGCTTAACACAGATCAGCACAATGTGCAGGTTAAAAAGAAGATGACAGAAGAGGATTTTATCCGAAATAATAGGCATATTAATGGTGGCGATGATCTTCCTCGAGAATTCTTGTCAGAGATTTACCATTCAATTTGTAAGAATGAAATCCGCACAACCCCTGAACAAGGTGCTGGATTTCCTGAAATGACACCAAGTCGATGGATCGATCTAATGCATAAGTCAAAAAAGACTGCTCCATTTATTGTATCTGATTCCAAGGCCTACCTTGATCATGATATGTTTGCCATAATGTCAGGCCCAACCATTGCAGCCATCTCTGTGGTATTTGATCATGCTGAACATGAAGAGGTATACCAAACATGCATGGATGGATTCCTAGCTGTTGCTAAGATTTCAGCTTGCCATCATCTTGAAGATGTTCTTGATGATCTAGTAGTGTCTCTTTGTAAGTTCACTACACTTTTAAACCCATCATTAGTTGAGGAACCAGTCCTTGCCTTTGGAGATGACATGAAAGCAAGAATGGCAACTATAACTGTATTTACTATTGCAAATAGGTACGGTGATTACATACGCACAGGTTGGAGAAATATTCTTGATTGCATCTTAAGACTGCACAAGTTAGGTCTTCTTCCTGCCCGTGTTGCCAGTGATGCAGCTGATGAGTCAGAACTTTCTGCTGAAACTGTGCATGGAAAGCCTATTATGAATTCTTTATCCTCAGCTCATATGCAATCTATTGGCACTCCAAGGAGATCCTCTGGATTGATGGGTAGGTTTAGTCAACTCTTATCTCTTGACACTGAGGAGCCAAGATCACAACCTACCGAACAACAACTTGCTGCGCACCAGCGCACCCTTCAAACAATACAGAAGTGTCACATTGACAGCATATTCACTGAGAGTAAATTTCTGCAAGCTGAATCTCTATTGCAGCTTGCAAGAGCACTCATTTGGGCTGCAGGTCGACCCCAGAAAGGGAACAGCACACCTGAGGATGAAGATACAGCAGTTTTCTGCCTGGAGTTGCTGATTGCAATCACTTTGAATAACAGGGATAGAATTGGGATTCTTTGGCAGGGTGTGTATGAGCACATATCCAATATTGTTCAGTCAACTGTAATGCCCTGTGCCCTGGTAGAGAAGGCTGTTTTTGGACTCCTGCGGATTTGCCAGCGGTTGCTCCCCTACAAGGAGAACATTGCTGACGAACTTCTGAGATCATTGCAACTTGTCTTGAAGCTTGATGCCCGGGTTGCTGATGCATACTGTGAGCAGATTACTCAGGAAGTCAGTCGCCTTGTGAAAGCAAATGCTTCTCATATAAGAACTCAGTTAGGATGGCGTACAATTACATCGCTACTTTCCATCACAGCTAGGCACAATGAAGCATCTGAGTCTGGGTTTGAGGCACTATTGTTCATAATGTCCGATGGTGCCCACTTGCTTCCAGCAAATTATGTTCTCTGTGTAGATACCGCAAGGCAGTTTGCTGAGTCTCGGGTTGGACAAGCAGAGCGATCTGTAAGGGCACTAGATCTCATGGCAGGTTCTGTCAATTGCTTGGCCCGGTGGACTGGTGAGGCTAAGGAAACAATGGAGGAGGAGCAAATGTCTAAGTTGTCTCAGGATATCGGAGAGATGTGGTTGAGACTAGTACAGGGTCTAAGGAAGGTGTGTTTAGACCAGAGAGATGAGGTTAGAAATCATGCTTTATCATCTCTGCAGAGCTGCTTGACAGGAGCCGATGGCATTTATCTCCCATATGGTTTGTGGTTACAGTGTTTTGATCTTGTAATCTTCACTGTGCTTGATGACCTGCTTGAGATTGCACAGGGACACTCTCAGAAGGACTACTACCGCAACATGGAAGGAACCCTTATCTTAGCAATGAAGCTCTTGTCCAAAGTTTTCCTTCAACAACTCCCAGATTTATCACAATTGACAACCTTCTGCAAGCTATGGTTGGGTGTACTGAGCAGAATGGAAAAATATATGAAGGTGAAGGTTAGAGGAAAAAGAAGTGAGAAGCTTCAAGAGACAGTGCCTGAGCTGCTTAAAAACACCTTGCTTGTTATGAAGATGAGGGGTATACTGGCACAGAGGAGTGCCTTGGGTGGTGATAGTCTGTGGGAATTAACATGGCTTCATGTGAATAACATTTCACCATCATTGCAACTTGAGGTATTCCCCGAGCAGGATTCTGAGCGTTTGCAGCACAACCATGGTGAACCAGTAGGAGGTTCTGTGCCTGATGAAATGGGTTCTGTTCCTTCAAGTGAAACCGCCAGCCATGAAGATGCTAGCATTGTTGGTTAA 4620 0.4227 MVGAGYEVKLPVI*NSKVKIEDFDEELYQISSTLTLNQVINRSDAIFRIEESNESLLCHTKNIAEMGRLKLQAGINAIEEEEPEECDASCPNRTTLACMIDSEIGAVLAVMRRNVRWGGRYVSGDDQLEHSLIQSFKTLRRQIFSWHNHQWQAINPALYLQPFLDVIRSDETGAPITGVALSSVYKILTLDVIDQNTANVEDAMHLVVDAVTSCRFEVTDTSSEEVVLVKILQVLLACMKSKASVMLSNQHVCTIVNTCFRIVHQAGAKGELLQQIARYTMHELVRCIFSHLQDVDHTDHALVNGSSKLKQETGGLNNEYAFGSRQSENGSLSSEYDNQPLPTNFAPNAASVVTANVMDENTAIAISGKEGVPYDMQLMTEPYGVPCMVEIFHFLCSLLNVVEHMEMGPRSNTIAFDEDVPLFALTLINSAIELGGPSIRRHPRLLSLIQGELFHNLMQFGLSTSPLILSMVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSRYGASYQQQEVAMEALVNFCRQKTFMVDMYANFDCDITCSNVFEDLANLLSRSAFPVNCPLSAMHILALDGLIAVIQGMAERIANGSVSSEYSPVNLEEYTPFWMVKCENYSDPNHWVPFARRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSMIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGDDLPREFLSEIYHSICKNEIRTTPEQGAGFPEMTPSRWIDLMHKSKKTAPFIVSDSKAYLDHDMFAIMSGPTIAAISVVFDHAEHEEVYQTCMDGFLAVAKISACHHLEDVLDDLVVSLCKFTTLLNPSLVEEPVLAFGDDMKARMATITVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESELSAETVHGKPIMNSLSSAHMQSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGRPQKGNSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICQRLLPYKENIADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANASHIRTQLGWRTITSLLSITARHNEASESGFEALLFIMSDGAHLLPANYVLCVDTARQFAESRVGQAERSVRALDLMAGSVNCLARWTGEAKETMEEEQMSKLSQDIGEMWLRLVQGLRKVCLDQRDEVRNHALSSLQSCLTGADGIYLPYGLWLQCFDLVIFTVLDDLLEIAQGHSQKDYYRNMEGTLILAMKLLSKVFLQQLPDLSQLTTFCKLWLGVLSRMEKYMKVKVRGKRSEKLQETVPELLKNTLLVMKMRGILAQRSALGGDSLWELTWLHVNNISPSLQLEVFPEQDSERLQHNHGEPVGGSVPDEMGSVPSSETASHEDASIVG* 1540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03555 1538 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 138 1500 - -
Rops11g03555 1538 MobiDBLite consensus disorder prediction 1500 1538 - -
Rops11g03555 1538 ProSiteProfiles SEC7 domain profile. 624 813 IPR000904 GO:0005085|GO:0032012
Rops11g03555 1538 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 385 546 IPR032691 -
Rops11g03555 1538 Gene3D - 625 707 - -
Rops11g03555 1538 SUPERFAMILY ARM repeat 225 1422 IPR016024 -
Rops11g03555 1538 FunFam ARF guanine-nucleotide exchange factor GNOM 625 707 - -
Rops11g03555 1538 SUPERFAMILY Sec7 domain 629 820 IPR035999 GO:0005085|GO:0032012
Rops11g03555 1538 CDD Sec7 632 815 IPR000904 GO:0005085|GO:0032012
Rops11g03555 1538 Pfam Sec7 domain 632 815 IPR000904 GO:0005085|GO:0032012
Rops11g03555 1538 Gene3D - 708 825 IPR023394 -
Rops11g03555 1538 FunFam ARF guanine-nucleotide exchange factor GNOM-like 707 825 - -
Rops11g03555 1538 SMART sec7_5 628 815 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03555 Rops-Chr11 67980923 67990539 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03555 K18443 - gmx:100780239 2738.75