Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03544 ATGGGTTCGAATCTGGAACCAGTGCCAATTACATCCCAAAAACATGACCCGGCTTGGAAGCATGTTCAGATGTATAAGAATGGGGACAAGGTGCAGTTGAAGTGCATATATTGTCTCAAGATGTTTAAGGGTGGCGGGATTCATAGGATTAAAGAACACCTTGCTTGTCAGAAAGGGAATGCGTCTACTTGCAGCCGTGTCCCACATGATGTTAGGCTTCATATGCAGCAGAGTTTGGATGGGGTTGTGGTGAAAAAGAGGAAAAAGCAGAAAATTGAGGAAGAGATTATGAATGTTAGTCCTTTGGCTGCTGCTGTAAATGCAGTTTCCAATCAGGTGGATGTAAATCAAGGGCTCCAGTCCATTGGAGTACAGAATTCAATGGAACACAATTCAAGTTTGGTGGTGCATCCTGGTGAAGGGATGAGTAGAAATCTAGAAAGAAGGAAGAAGATAAGAGCCAGCAAGAATCCTGCACCAATTGGTACAAACTCTGAGGGTGTTGTTGCTGTGGAGAAAAATGCATTGTTCCTCAAAAAGGTGGACCATCACATTCATATGGCAATAGGTCGGTTTTTGTATGATATCGGTGCACCTTTTGATGCTGTGAACTCAATCTATTTTAAGCAAATGGTTGAAACAATTGCTTCTGGGGGATCAGGTTTTCAATGTCCCTCACATCATGAACTTCGGGGTTGGATCCTTAAAAACTCAGTGGAAGAAGTGAAGAATGATGTAGACAGATGCAAGATGACATGGGGGAGGACTGGCTGTTCTATTTTGGTTGATCAATGGACTACAGAAACAGGTAGAATACTGATAAATTTTTTGGCATATTGTCCTGAAGGCTTAGTCTTTTTGAAATCTGAGGATGCGACTGAGATGTCTACTTCAGCGGAATTTCTATGTGAGTTGATAAAACAAATGGTAGAAGAAGTTGGAGTAGGGCAAGTGCTGCAAGTGGTTACATCAGGTGAAGAACAATATGCTGTTGCTGGGAGACGGCTGACTGATACTTTTCCCACCCTTTATTGGAGCCCTTCTGCAGCTCTTTGCATTGATTTGATTCTTGAAGATTTTGGAAATCTTGAGTGGATTAGTGCAGTAATTGAACAAGCTAAATCTATAACAAGATTTGTCTACAATTACAGTGCAATTTTGAACATGGTTAGAAGGTATACTTTAGGGAATGATATTGTGGATCCCTCTCTCTCACGCTTTGCGACAAACTTCACCACATTGAAACGAATGGTTGATCTTAAACACAATTTACAGGCCATGGTCACTTCTCAGGAGTGGATGGATTGCCCATATTCAAAGAAAACAGCAGGTTTGGAAATGTTAGATTGCCTAAGCAATGAAACATTTTGGTCCTCGTGTGACCTGATTGTTCGTCTAACAGTTCCTCTCTTGAGAGTTCTGAGAATAGCTGCTAGTGAGACAAGACCTGCAATGGGATACATTTATGCTGGAATGTACAGGGCAAAAGAAGCGATTAAGAAAGCACTTGTTAAGAGGGAGGATTATATGGTGTACTGGAATATTATACATCACAGATGGGAAAAGTTGTGGCATCATCCTCTTCATGTTGCAGGCTTCTACCTTAATCCAAAGTTCTTCTATAGTATTGAAGGGGATATACATAATGAGATTCTCTCGGGGATGTTTGACTGCATAGAGAGATTGGTACCTGATACAAGAATCCAAGATAAAATTATCAAAGAGATAAACTTATACAAGTCTGCTGCTGGAGACTTTGGGAGAAAGATGGCAGTCAGAGCTAGAGATAATCTGCTTCCTACTGAATGGTGGTCAACATATGGAGGAGGCTGCCCCAACTTGTCGCGTTTGGCAATTCGTATTCTCAGCCAAACATCCAGTGTGATGTCCTGCAAGAGAAACCAGATTCCTTTCGAACAAATGATCAGTACAAGGAATAATATAGAGCACCAACATCTTACTGATATTGTCTTTGTTCATTACAACTTACGATTAAAACAAATGTATATGAGTAAAGAACATGATTCTAGTGATCCCCTATCATTTGAAAGCATTAGTAATGTGGAAGACTGGATAAGGAAAAGGGATTTAGACTTAGAAGAGTACGGGAACTCGGATTGGATGGCATTGGATTCATCTTCTGTTAACACAATGCTTTTAAGGCCATTAAATGATGAAGCTGAAGAATTGGGTGAAGGGTTTGATGATCATGAGATTTTCAGTATGAAAGATGATGAGGATGAAAATACTGAGGACAAGTTGGGAAACCATTAG 2274 0.405 MGSNLEPVPITSQKHDPAWKHVQMYKNGDKVQLKCIYCLKMFKGGGIHRIKEHLACQKGNASTCSRVPHDVRLHMQQSLDGVVVKKRKKQKIEEEIMNVSPLAAAVNAVSNQVDVNQGLQSIGVQNSMEHNSSLVVHPGEGMSRNLERRKKIRASKNPAPIGTNSEGVVAVEKNALFLKKVDHHIHMAIGRFLYDIGAPFDAVNSIYFKQMVETIASGGSGFQCPSHHELRGWILKNSVEEVKNDVDRCKMTWGRTGCSILVDQWTTETGRILINFLAYCPEGLVFLKSEDATEMSTSAEFLCELIKQMVEEVGVGQVLQVVTSGEEQYAVAGRRLTDTFPTLYWSPSAALCIDLILEDFGNLEWISAVIEQAKSITRFVYNYSAILNMVRRYTLGNDIVDPSLSRFATNFTTLKRMVDLKHNLQAMVTSQEWMDCPYSKKTAGLEMLDCLSNETFWSSCDLIVRLTVPLLRVLRIAASETRPAMGYIYAGMYRAKEAIKKALVKREDYMVYWNIIHHRWEKLWHHPLHVAGFYLNPKFFYSIEGDIHNEILSGMFDCIERLVPDTRIQDKIIKEINLYKSAAGDFGRKMAVRARDNLLPTEWWSTYGGGCPNLSRLAIRILSQTSSVMSCKRNQIPFEQMISTRNNIEHQHLTDIVFVHYNLRLKQMYMSKEHDSSDPLSFESISNVEDWIRKRDLDLEEYGNSDWMALDSSSVNTMLLRPLNDEAEELGEGFDDHEIFSMKDDEDENTEDKLGNH* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03544 757 SUPERFAMILY Ribonuclease H-like 258 666 IPR012337 -
Rops11g03544 757 ProSiteProfiles Zinc finger BED-type profile. 13 71 IPR003656 GO:0003677
Rops11g03544 757 Pfam Protein of unknown function (DUF 659) 225 376 IPR007021 -
Rops11g03544 757 MobiDBLite consensus disorder prediction 734 757 - -
Rops11g03544 757 PANTHER OSJNBA0013A04.12 PROTEIN 29 667 - -
Rops11g03544 757 MobiDBLite consensus disorder prediction 733 757 - -
Rops11g03544 757 Pfam hAT family C-terminal dimerisation region 584 663 IPR008906 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03544 Rops-Chr11 67775339 67778598 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03544 - - gmx:100817502 1296.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03544 11 67775339 67778598 Rops11g03544 11 67775339 67778598 ECH