Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03540 ATGGCTCCAAAATCTCTTGACAACAATAGCAAAGAACATTCCTCTTTCTGGACAACCAAACAGAATAAACAATTTGAGAAGGCACTGGCTATTTATGATGAAGACACCCCAGATCGCTGGCAAAATATAGCTAACGCAGTTGATGATAAATCAGTCGAGGAAATAATGATACACTATGCAATTCTTCTGGAGGATATTAGTAACATAGAACGTGGACTCGTGCCAATTCCGAATTATAAAAGCTACTCTCTGAAGAATATGGAAGAAGATGAAGATGAAGATGAAGATGAAGAATACGCCATGGACCAAGAAGATGAAAATCAAAGTATATGTTTGAAGAAGATGAAAGACAAGAAGAAGACAATTTATGGTACCACATTTACATTTTAG 390 0.3615 MAPKSLDNNSKEHSSFWTTKQNKQFEKALAIYDEDTPDRWQNIANAVDDKSVEEIMIHYAILLEDISNIERGLVPIPNYKSYSLKNMEEDEDEDEDEEYAMDQEDENQSICLKKMKDKKKTIYGTTFTF* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03540 129 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 8 95 IPR044636 GO:0003700
Rops11g03540 129 Gene3D - 8 76 - -
Rops11g03540 129 MobiDBLite consensus disorder prediction 87 107 - -
Rops11g03540 129 CDD SANT 17 59 IPR001005 -
Rops11g03540 129 MobiDBLite consensus disorder prediction 88 104 - -
Rops11g03540 129 SUPERFAMILY Homeodomain-like 15 70 IPR009057 -
Rops11g03540 129 FunFam Transcription factor SRM1 9 76 - -
Rops11g03540 129 SMART sant 13 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03540 Rops-Chr11 67718806 67721209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03540 - - gmx:100788168 114.775