Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03534 ATGAAGGGACAGTTGCTGATACTGGTGAAGTTTTTGACACGAGATAACACTGTCTTCTCTTTTGAGCTTGGAAAGGACAGTGTTATCAAGGCTTGGGAAATTGCAGTGAAAACCATGAAGGTTGGAGAAATTGCAAAAATAACTTGCAAGCCAGAATATGCATATGGAAGTGCGGGATCTCCTCCAGATATTCCTCCAGAGTACCATTCTGATTTTATGCACCAAGTATTTTGTTTGAACACATAA 246 0.3984 MKGQLLILVKFLTRDNTVFSFELGKDSVIKAWEIAVKTMKVGEIAKITCKPEYAYGSAGSPPDIPPEYHSDFMHQVFCLNT* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03534 81 Gene3D - 2 73 IPR046357 GO:0003755
Rops11g03534 81 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 15 67 IPR001179 GO:0003755
Rops11g03534 81 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 66 IPR001179 GO:0003755
Rops11g03534 81 SUPERFAMILY FKBP-like 15 67 - -
Rops11g03534 81 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 14 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03534 Rops-Chr11 67634649 67634987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03534 3 66 Calmodulin-binding Proteins AT5G48570 54.545 1.25e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03534 K01802 - vun:114187161 107.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03534 11 67634649 67634987 Rops11g03534 11 67634649 67634987 ECH