Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03524 ATGCTGTTACAGTCTCTGCTACTCACTTTCCGATCTAACTTCACATTTTCCCCACAATCTCACATTTTCCGTGCAACAACTTCGACGAATTCATCCATGGCGCCTCCAATCCTTTCCCTTGCTCTTCCCTCAGACACTGGACGAGTTCTCAGTATTCAATCTCACACCGTTCAGGGGTATGTTGGTAATAAATCAGCTGTGTTCCCTCTGCAACTACTGGGCTATGATGTGGATCCAATTAATTCTGTGCAGTTTTCAAATCATACAGGATACCCGACTTTTAAGGGTCAGGTTTTGAATGGACAGCAACTTTGGGATTTAATAGAAGGCCTTGAAGGAAATGATTTATTGTACTATACTCACTTGTTGACAGGTTATATTGGTTCAGTGTCTTTTCTAAACACTGTATTGGAAGTTGTCAGCAAGCTTCAGTCAAAAAACCCAGAGCTTATATATGTATGTGATCCAGTGATAGGTGATGAAGGAAAGCTTTACGTTCCTCAAGAGCTGGTATCAGTATATCGTGAGAAGGTTGTTCCGGTAGCTACCATGTTGACTCCCAACCAGTTTGAAGCAGAATTACTGACAGGATTTAGGATTCAGTCTGAAGGAGATGGTCGGGAAGCTTGTAAGTTTCTTCATGAAGCTGGGCCTCCGAAGGTTGTAATTACAAGTATTAATATAGACGGGAATTTTCTCCTCATTGGCAGTCATCAAAAGGAAAAGGGACAACCTCCCAAACAATTTAAGATCATGATTCCAAAAATACCAGCTTATTTTACGGGAACGGGAGATCTTGTGACTGCACTTCTTCTTGGTTGGAGCAATAAATACCCAGACAACCTTGAGATAGCTGCAGAACTTGCAGTGTCAAGCTTGCAGGCAGTTTTGCACAGGTCACTCGGTGACTACAAAAGTGCTGGACATGATACCCAGTCAACCAGTTTAGAGATCAGATTAATTCAAAGCCAGGATGATATTCGTAGCCCACAAGTCAAACTTAAAGCTGAAATATATAGCTAA 1023 0.4174 MLLQSLLLTFRSNFTFSPQSHIFRATTSTNSSMAPPILSLALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGYPTFKGQVLNGQQLWDLIEGLEGNDLLYYTHLLTGYIGSVSFLNTVLEVVSKLQSKNPELIYVCDPVIGDEGKLYVPQELVSVYREKVVPVATMLTPNQFEAELLTGFRIQSEGDGREACKFLHEAGPPKVVITSINIDGNFLLIGSHQKEKGQPPKQFKIMIPKIPAYFTGTGDLVTALLLGWSNKYPDNLEIAAELAVSSLQAVLHRSLGDYKSAGHDTQSTSLEIRLIQSQDDIRSPQVKLKAEIYS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03524 340 PANTHER PYRIDOXAL KINASE 39 336 IPR004625 GO:0008478|GO:0009443
Rops11g03524 340 Gene3D - 44 339 IPR029056 -
Rops11g03524 340 Pfam Phosphomethylpyrimidine kinase 127 230 IPR013749 -
Rops11g03524 340 CDD pyridoxal_pyridoxamine_kinase 48 302 IPR004625 GO:0008478|GO:0009443
Rops11g03524 340 NCBIfam pyridoxal kinase 48 337 IPR004625 GO:0008478|GO:0009443
Rops11g03524 340 SUPERFAMILY Ribokinase-like 47 337 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03524 Rops-Chr11 67395112 67404171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03524 K00868 - gmx:100811288 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03524 11 67395112 67404171 Rops11g03524 11 67395112 67404171 ECH