Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03521 ATGGGTGTAGTGAGGGGTGTGATATTGGATGAATCAGTACTCTTGGTTGAAGGTGATGATGATAAAAATGTATCTTCACTACGGCAAAGAGCTGAGTCTCTCATCCGAACACTCGACCTGTCCAGAACCCATGTGGGAATTGCTTATGGTGTGGACCTTCTGGATGACAAGGTGAGTATTCTGAAAAGAATTGCTAGTTTGTACTCACTTGATTGCTTTATCTTAAATGATCCTGGAAGTGAGGTTATGCCTGAATGGATCAATACCGATGATGACGGTATTATTTATCTTGTTTCTAACAAGAAGGAGTTCTTACATAAATTAAGCAGCAATAAATGGCTGATTGTTGTTCTGAATGATGGAGGTAAAAGTTCATGTGACACTCCAAGTATGCTTCAGATTGAAAATTTGGAAGAGTTGCCATTGACCATTTGCCACTTAAATAAAAGGTCAATTGGAACCAATGCTGTAACTGTGAGTTATATAATGAAGCCTTCTCGTGTGGAAGATTTTGCAAAGAGGGGTGCATTCCCTTTGTGTCCTACACAAAATGGCTTGATGTTTGTACCTCTCACATCCAAGTTGCCTTTATGGTCTCAATTAAAGGATATTGACATAGTTCTCCATAAAGCCACTGATGAAATATTATCTATTGAAGATGATAAACTGACCTTTACACAGAGCATGCAAGAACTGCAAAGATATTTGGATCAGCACCAGGATTGCTGTGTGATTGACCCTCTCAGTAACATTTATCCTTTATTGGATCGGCTAGATATTCAACAAGTTCTACTTGGCTTGGCAGAACTGAATACGGAACGAGGCTATTTGATCAGAGGGGCCCGTTTTCTTAAGGTTGATAATTTTAATGAATTTAATTTTACAACTGGATTAGCTGAAGCTGGATTGTCTCTTCCATGTATAGTGAAACCTAAAGTTGCTTGTGGTGTCAGTGATGCCCATAAGATGGCAATTGTTTTCAGAGTTGATGATTTTAAGAATTTAAGTGTCCCTCTTCCAGCTGTTATTCAGGAATATGTAGATCATTCATCCACTTTGTACAAATTTTATGTCCTGGGTGAAAATATTTTCCATGCTGTCAAGAAATCAATACCAAATGCTGATATTTTGATGAAATTATCTAATGGTGATGACCTCAAACCTCTATTGTTTGATAGCTTGAAATCTCTACCCACTGCTGACAGCATCAAGGATTCTGGAGCCAGTAACCATGGTGTGACAAGTAATGAGTCTATTGACCTTAAGCTGGTTACAGATGCAGCAAATTGGCTTAGGAGAAGGCTTGATCTCACTGTCTTTGGTTTTGATGTTGTAATTCAGGAAGGCACTCATGATCATGTAATTGTGGATGTAAACTATCTCCCATCATTTAAGGAAGTGCCTGATGACATTGCTATTCCTGCCTTCTGGGAGGCCATTAGAAATAAGTTTGACTGTAGGATGTTGTCTAAATAA 1476 0.3855 MGVVRGVILDESVLLVEGDDDKNVSSLRQRAESLIRTLDLSRTHVGIAYGVDLLDDKVSILKRIASLYSLDCFILNDPGSEVMPEWINTDDDGIIYLVSNKKEFLHKLSSNKWLIVVLNDGGKSSCDTPSMLQIENLEELPLTICHLNKRSIGTNAVTVSYIMKPSRVEDFAKRGAFPLCPTQNGLMFVPLTSKLPLWSQLKDIDIVLHKATDEILSIEDDKLTFTQSMQELQRYLDQHQDCCVIDPLSNIYPLLDRLDIQQVLLGLAELNTERGYLIRGARFLKVDNFNEFNFTTGLAEAGLSLPCIVKPKVACGVSDAHKMAIVFRVDDFKNLSVPLPAVIQEYVDHSSTLYKFYVLGENIFHAVKKSIPNADILMKLSNGDDLKPLLFDSLKSLPTADSIKDSGASNHGVTSNESIDLKLVTDAANWLRRRLDLTVFGFDVVIQEGTHDHVIVDVNYLPSFKEVPDDIAIPAFWEAIRNKFDCRMLSK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03521 491 PIRSF ITPK_unchar_domain 1 491 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Rops11g03521 491 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 154 483 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Rops11g03521 491 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 294 469 IPR040464 -
Rops11g03521 491 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 159 251 IPR041429 -
Rops11g03521 491 Gene3D - 247 462 - -
Rops11g03521 491 FunFam Inositol-tetrakisphosphate 1-kinase 4 247 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03521 Rops-Chr11 67358455 67361173 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03521 K01765 - gmx:100810742 795.423