Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03509 ATGAGAAGCCCAAGCCCAAGCCCAAACGTGGACAGCTCTAAGAAAAGTCTGAGCAAGCAACGCCGTCACGGCTCTAACCATTCCCTCCACCACACGACGGCGCTGCCTGAAGTGAAGGAGAGGGTTACCACCTTTGTTCTCCCTGGTTTCTTGCAGATGAAAATCTTAGAAGCCAATGCTGGTGCACTCACGAATTTTGAGGTCCTTGATTTCTTAAGAGCTAAAGGGGCTTCAAAAGATCCAACTAGGGTTATTGCCAAAGTAGCACAATCTGAATACAAGGTTTATGATTATTTGGTTAATACTGCTGCCTCTGATCAAACAAGGGAGAGCATCAATGAGTTCCTGACAAGTGTTAAACAACATGACCTGGCAAAAGCTGAGGTTCTTAACATAATAAACATTAGGCCAGCTGCTCCTGTTGGAATATTCCCAATCATAGAGAATTGCGAGGACCGTTTTCCAGATGAAGAGATCGAAGAAATAATAGAGCAGGTGAAGAAAACATGGCCGACACTGCCTGCCAAAACGACGCCGGAAGAAATCACTGAGGGCAATGAAGAAACTGCAACACTGAAACAAGAAAAGGGTAATGAGATTAGTCAAGACCAAAATGAAAGTGGAGAACAAATGGACACAAGCTGA 645 0.445 MRSPSPSPNVDSSKKSLSKQRRHGSNHSLHHTTALPEVKERVTTFVLPGFLQMKILEANAGALTNFEVLDFLRAKGASKDPTRVIAKVAQSEYKVYDYLVNTAASDQTRESINEFLTSVKQHDLAKAEVLNIINIRPAAPVGIFPIIENCEDRFPDEEIEEIIEQVKKTWPTLPAKTTPEEITEGNEETATLKQEKGNEISQDQNESGEQMDTS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03509 214 FunFam RNA polymerase II, Rpb4, core protein 53 171 - -
Rops11g03509 214 Pfam RNA polymerase Rpb4 62 169 IPR005574 GO:0006352|GO:0030880
Rops11g03509 214 SUPERFAMILY HRDC-like 51 171 IPR010997 GO:0000166|GO:0044237
Rops11g03509 214 PANTHER CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN 53 191 IPR038846 GO:0005666|GO:0006384
Rops11g03509 214 MobiDBLite consensus disorder prediction 1 34 - -
Rops11g03509 214 Gene3D - 49 171 IPR038324 -
Rops11g03509 214 MobiDBLite consensus disorder prediction 181 202 - -
Rops11g03509 214 MobiDBLite consensus disorder prediction 174 214 - -
Rops11g03509 214 SMART rpol4neu2 53 173 IPR006590 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03509 Rops-Chr11 67122909 67135837 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03509 K25304 - gmx:100789488 234.187