Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03495 ATGTCAGTCTCATGTGGGGTGGAGTGTGTGCTCGTACTCGGTTGTGCACGTTGGATGTGGAAACGATGCACCTACATCGGTTCTTACGATAGTGCCACGTGGCCACCGGCCACCGACGACGAGTTCGAACCGGTGCCACGTGTATGCCGGATCATCCTCGCCATCTACGAGCCCGATCTCCGGCATCCCCAGTATTACAACCCCGCCGGAGGGTACCGTTTGAACCCTGACTGGGTCATAAAACGGGTCACATATGAGGAAACTTCCGGCCAGGCGCCGCCGTATATCATCTACGTCGACCATGACCACCGTGAGATTGTGTTGGCGGTGAGGGGTCTAAACTTGGCAAAGGAAAGTGACTACAAGCTTTTATTGGATAACCGTTTGGGGCAGCAAATGTTTGATGGTGGTTATGTTCATCATGGTTTGTTGAAATCTGCGGTTTGGTTATTGAACAGGGAATCTGAGACTTTGAAGAATTTGTGGGTTGAGAATGGCTCAGATTATGGGATGGTGTTTGCTGGGCACTCTTTGGGTTCTGGGGTGGTGTCTTTGTTGACTATTCTTGTGGTCAATCATAGGGAACGTTTGGGAGGGATTCCCAAAGAGAAGATTAGGTGTTATGCTCTTGCTCCTGCCAGGTGTATGTCACTGAATTTGGCTGTCAAATATGCCAATGTGATACATTCTATTATATTACAGGATGATTTCTTGCCGAGAACGGCTACTCCATTGGAAGATATATTCAAATCGATATTATGCTTGCCCTGCTTATTATTCTTGGTTTGCCTGAGGGACACCTTCATACCTGAGGGTCGAAAGCTAAGAGATCCAAGGAGACTTTATGCACCTGGAAGAATGTATCATATTGTGGAGAGAAAATTTTGCAGATGTGGTAGATTCCCTCCTGAAGTGAGGACTGCTATTCCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCTTGTAATGCAACATCAGATCATGCAATTATTTGGATTGAGAGGGAGGCAGAGAAAGCCTTACAATTAATGAAGGATCAACACTCTGAAACTGTGACAGTCCCTCCAACCGTACAAAGGTTTGAGAGGTTGAAGACCATAGAGAAAGAACATAAAGATGCTTTAGAAAGAGCTGTTAGCTTAAATGTACCTCATGCAGTGGACACTGCAGAGGAAGAACCTCCTGAGAACAATGAAGGTGAGGCATCCAGTGGTGGGGGCAATGACACCACCTCAAGCACCCCATCAAAATCAAGTGGTGGAAGGTCAAACTGGGATGAGGTGGTTGAAAAACTGTTACATAGGAAGAAAGAGACAGCAGATAAACACATTGAAAAGGATACTAATGTCCCACAATAA 1359 0.4592 MSVSCGVECVLVLGCARWMWKRCTYIGSYDSATWPPATDDEFEPVPRVCRIILAIYEPDLRHPQYYNPAGGYRLNPDWVIKRVTYEETSGQAPPYIIYVDHDHREIVLAVRGLNLAKESDYKLLLDNRLGQQMFDGGYVHHGLLKSAVWLLNRESETLKNLWVENGSDYGMVFAGHSLGSGVVSLLTILVVNHRERLGGIPKEKIRCYALAPARCMSLNLAVKYANVIHSIILQDDFLPRTATPLEDIFKSILCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHAIIWIEREAEKALQLMKDQHSETVTVPPTVQRFERLKTIEKEHKDALERAVSLNVPHAVDTAEEEPPENNEGEASSGGGNDTTSSTPSKSSGGRSNWDEVVEKLLHRKKETADKHIEKDTNVPQ* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03495 452 MobiDBLite consensus disorder prediction 376 452 - -
Rops11g03495 452 Pfam Lipase (class 3) 107 242 IPR002921 GO:0006629
Rops11g03495 452 Pfam Lipase 3 N-terminal region 7 70 IPR005592 GO:0016042
Rops11g03495 452 CDD Lipase_3 41 240 - -
Rops11g03495 452 SUPERFAMILY alpha/beta-Hydrolases 38 242 IPR029058 -
Rops11g03495 452 MobiDBLite consensus disorder prediction 427 452 - -
Rops11g03495 452 Gene3D alpha/beta hydrolase 36 251 IPR029058 -
Rops11g03495 452 MobiDBLite consensus disorder prediction 401 423 - -
Rops11g03495 452 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03495 Rops-Chr11 66911988 66915786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03495 1 343 Miscellaneous Gene Families AT5G37710 76.968 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03495 - - gmx:100798831 773.852