Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03008 ATGGCCAGCACCAGTGGCACAAAGGGTCCTTCCTTGATGTCAAGGCAGCCATCAAGGAGGATGACAAGGGCAACTACAAGGACTGTGGAGTTGCCAAATGAGGAGAACATTAGGGACAGTGAGATTGTGCCTTCCTCACTTGCTGTCCTTGTGCCAATTCTAAGAGCAGCACTTGAGATTGAGGAGGAGAATCCTAGAGTTGCCTATCTTTGTCGTTTTCATGCATTTGAGAAGGCTCATACAATGGATCCACAATCAAGTGGGCGTGGTGTTCGTCAGTTCAAGACTTACCTATTACACAAACTTGAAAGGGAAGGGGAGCTTACAGAAAAAAAAGCTAAAAGAAGTGATGCTAGGGAGCTGCAGTCCTACTACCAATCATTCTATGAGAAGAGAATCCTCCGGGATGGTGAATTTACCACAAAACCGGAGGAGATGGTTAAGAATGTTCAGATTGCCACTGTATTGTATGAAGTGCTGAAGACTATGGTACAAAGTATTGATGAGAAGACAAGAAGATATGCTGAAGATGTTGAGAATAAGAGGGGACAATATGAACACTATAATATCCTTCCATTATATGCTGTTGGTGTTAAACCAGCAATCATGGAACTTCCCGAGATCAAAGCAGCAATTTATGCATTACGTAAGGTGGACTATCTTCCAAAGCCCATCATCCGTTCAATACCTGATGCCTCTAATGATGATTCTACAATGCCTACGGAGAGGGTTAAAAATGTGACTGATATACTTGATTGGATTGCCTCAACTTTTGGGTTTCAGAAAGGAAATGTGGCAAATCAAAGGGAGCACCTTATATTATTACTTGCCAACTTGGATATGAGGAATAGGACTGAACCTTCTGGGCTCCGTGAAGAAACTGTAGAAAAGTTGATGGCTACAACTTTCAAAAATTATGAGTCATGGTGTCATTATGTGCGTTGTAAATCCAATCTTAGGTTTCCAGATGGTCTTGACAAACAACAGTTAGAACTGATTTACATTGCACTTTATCTTCTAATATGGGGAGAAGCTTCAAATATTCGCTTTATGCCTGAATGCCTTTGCTATATTTTCCATCATATGTGCGATGATATCTTTGGGATTTTATATAGCAATGCACATCGTGTGAGTGGGGACGGATACCAAATACAAGCACGTGATGATGAACGTTTTCTCAGAGAAGTCATAACACCTTTATATGAAGTTTTAATGAAGGAAGCAAAGAGAAGCAACAAAGGCAAGGCAAGTCATTCCAGTTGGAGAAATTACGATGATCTTAATGAATACTTTTGGTCTGACAAATGTTTTAAGCTAGGTTGGCCAATGAATCTCAATGCAGATTTTTTTAGGCATACAGATGAGACACAGACAGCACATCATGGCCCTAGCCAAGCCAGTACTGTAGCTGGGAAGAAGAAGCCCAAAACAAATTTTGTTGAAGTTCGTACTTTTTTGCATCTGTATAGGAGTTTCGATCGAATGTGGATATTTTTTATATTGGCTTTACAGGCAATGATTATTATTGCATGGAGTTCCTTGGGACCTGTTGGAGTTCTTTCTGATCCAGATGTCTTCAGAAATGTCATGACAATATTTATCACTTATGCTTTTCTCAATTTTCTTCAAGCAACTATCGACATTATTCTTACTTGGAATGCATTGAGGAATATGAAATTCACTCAGTTGGTTCGGTATCTTCTGAAATTTGCGATAGCAGCTGTTTGGGTTGTTGTGTTGCCAGTCAGTTATTCTAGTTCTCTACAGAATCCATCAGGGCTCATCAGATTTGTCACCAGTTGGGCTGGGGATTGGGGGAACCAGTCACTTTATACCTATGTTGTTGCATTATATTTGGTACCAAACATAGTGGCTGCAATACTATTTTTCCTTCCACCTCTGAGGAGAATATTGGAGCGCTCAAATATGCGAATCATTACCCTTTTAATGTGGTGGGCTCAGCCAAAATTGTATGTAGGCAGGGGCATGCATGAGGGCACATTATCACTGCTGAAGTACACCCTCTTTTGGATCATGCTGCTAATTACCAAGCTAGCATTCAGTTACTATGTGGAGATATTGCCTCTTGTTGGACCGACCAAAGTAATCATGAGAATGCATATAGATAACTACCAGTGGCATGAATTCTTTCCAGAAAATGAGATTCACAATATATGTGTTGTCATTGCAATATGGGCTCCAATTATCCTGGTTTATTTTATGGATACTCAAATATGGTATGCCATTTATGCCACTTTATTTGGTGGGATTGTTGGAGCCTTCAGCCATTTGGGTGAGATAAGGACACTTGGAATGCTCCGCTCCAGATTTCAATCTGTACCACTAGCTTTTAGTCAACGCTTTTGGACTGGAAGAAACATAAAGAATATACAGGAGGGCATGGATGATTCATATGAACGGGATAATATTTCATACTTCTCTCAGGTTTGGAATGAGTTCATAAATTCTATGAGAGAGGAAGACCTCATCAGTAACAGGGATAGAGATTTGCTTCTTGTTCCATACAGTTCAGTTGATGTTTCTGTCATTCAGTGGCCTCCATTCTTGCTTGCTAGCAAGATTCCTATAGCTGTTGACATGGCGAAAGATTATAAGAAGGATGACGATGCTGAGTTGTTTAGAAAGATTACGAATGATGGGTATATGTATTCAGCAGTTGTCGAATGCTATGAGACTCTCAAGGACATAATACTGAACCTTCTGCGAGATGCGGAAGATAGGATGATTATAGAACGCATATGCCATAAAGTAGAAGTTTGCATAGATCAGGAAAAATTTGTCAAGGAATTCAAGATGAGTGGCTTGCCTTCACTCAGTGAGAAGTTGGAGAAATTCTTATCTCTATTGCGATCTGAAGATGGCAAACTTGAGTCCCAGATAGTCAATGTCCTGCAGGATATTGTAGAAATTATCATACAGGATGTTATGTTTGATGGCAATGTAATTTTGCAAACACCTCAGCATTATATTGGTGAGAGAGGGCAGAGGTTTGTTAACATTGACACTTCTTTTACACAAAAGAAATCAGTGATGGAAAAGGTTATTAGGCTTCATTTGCTTTTAACAGTCAAGGAATCGGCCATAAATGTGCCCCAAAATCTGGAAGCCCGCCGCCGTACTACATTCTTTGCAAACTCCTTATTTATGAATATGCCAAAGGCTCCCAAAGTTCGGGACATGTTGTCCTTCAGTGTTCTAACACCATATTACAAAGAAGATGTTCTATATTCTGATGAGGAACTCAATAAGGAAAATGAAGATGGAATATCAATTTTATTCTACCTAACAAAGATATATCCTGATGAATGGGCCAATTTACATGAGCGCATAAAAAGTGAAAATCCTGAGGATGATAAAGCCGAGTTAATTCGTCGGTGGGCATCTTGCAGAGGGCAGACACTCTATCGAACAGTGAGAGGAATGATGTACTATTGGCAAGCTTTGATCCTTCAGTGGATGATAGAATATGCAGAAGATGATGCGGATTTCTACGAAATAGATAACAGGCTTCTTGAACGAGCACATGCTCTGGCTGATTTAAAGTTCACCTATGTTGTTTCTTGTCAATTGTACGGTTCTCAGAAGAAGTCTAAAAATACTAGAGACAGAAGCAGCTACACTAATATTCTCAATCTGATGTTAAATCATTCAGCCCTTCGTGTTGCTTACATAGATGAAACAGAAGACACAAAGGGTGGAAAGAAAGTCTATTACTCTGTTCTTGTCAAGGGAGGGGATAAGTATGATGAGGAAATATATCGCATTAAGCTTCCTGGTCCTCCAACAGAAATTGGTGAAGGGAAACCTGAAAACCAAAATCATGCCATTATATTTACTCGTGGAGAAGCCTTGCAGACTATAGACATGAATCAGGATAATTACTATGAAGAAGCTTTCAAAATGAGAAATGTATTGGAAGAATTCCACAAAGGTCATAGAGGGCAACGGAAACCTACCATATTGGGTCTAAGGGAGCATATATTTACTGGAAGTGTTTCATCACTTGCTTGGTTTATGTCAAACCAGGAGACCAGCTTTGTGACCATTGGCCAACGAATTTTGGCAAATCCTTTAAGGGTCCGATTTCATTATGGTCATCCTGATATATTTGACAGAATCTTCCACATAACAAGAGGTGGCATAAGCAAAGCATCAAAAGTTATCAACTTGAGTGAGGATATATTTGCAGGGTTCAATTCAACTCTACGTCAAGGATTTATCACACATCATGAGTACATACAAGTAGGTAAGGGGCGTGATGTGGGCATGAATCAGATTTCACTCTTTGAGGCTAAGGTTGCAAATGGAAATGGAGAACAAACACTTAGTCGGGATGTTTATCGTCTTGGACGACGATTTGACTTCTACAGGATGTTGTCATTCTACTTCACAACAGTTGGTTTCTATTTCAGTAGCATGATAACCGTGTTAACTGTCTATGTGTTCTTATATGGACGTCTATATATGGTATTGAGTGGAGTTGAGAGAGAAATTCTTCTAAGTCCAAACATACATCAGAACAAAGCCCTTGAACAGGCCTTGGCAACCCAGTCTGTTGTTCAATTAGGCTTACTGCTGGTGCTGCCCATGGTTATGGAAATTGGCTTGGAGAAGGGATTTCGCACTGCCTTGGGTGATTTTATCATCATGCAGCTGCAGCTAGCCTCTGTGTTCTTTACTTTCCAGCTTGGAACAAAAGCTCACTATTTTGGAAGAACAATCTTGCATGGGGGCTCTAAATATAGGCCAACTGGTCGTGGATTTGTTGTCTTCCATGCAAAGTTTGCTGAGAACTACAGGATGTACTCGCGAAGTCACTTCGTGAAGGGCTTGGAGATACTTTTGCTATTGATTGTTTATGAAGTATATGGGGAGTCATATCGCAGCACAAGTCTTTTTTTCTTCATCACAATCTCAATGTGGTTTTTGGCCATTTCATGGCTATTTGCTCCTTTCTTGTTCAATCCTTCTGGCTTTGATTGGCAAAAAACAGTGGAAGATTGGACAGATTGGAAGCGGTGGATGGGAAATCGTGGTGGTATCGGTATCCCATCTGATAAAAGCTGGGAATCTTGGTGGGATGAAGAAAATGAACACCTGAAATACTCAAATATCAGGGGGAAAATACTTGAGATAATTCTTGCATTTCGCTTCTTTATCTACCAATATGGAATTGTCTACCACCTGAATATTACTCATCGTAGCAAAAATATTATGGTATATGGACTTTCTTGGGCAGTTTTGGTAATAGTCCTTATTGTCTTGAAGCTGGTTTCCATGGGTAGAAGAAAATTTGGGACAGACTTTCAGCTCATGTTTCGTATTCTCAAGGCACTTCTCTTTCTTGGCTTCTTGTCAGTAATGACAGTATTATTTGTGGTATGCGCGCTTACCATATCAGATCTGTTTGCTGCCATTCTTGCCTTCATGCCCTCCGGATGGGCCATTATTCTGATTGCACAAACATGTAGGGGACTCTTGAAGGGAGTTAAACTATGGGCTTCAGTGAAAGAGCTTTCAAGAGCATATGAATATGTAATGGGATTAATAATCTTCATGCCAACAGCCGTTTTGTCATGGTTCCCATTTGTGTCAGAGTTCCAAACAAGGTTATTATTCAATCAAGCATTTAGTAGAGGGCTCCAGATTTCAATGATTCTTGCTGGAAAGAAGGACACTTTCAAAACTGAATGA 5715 0.4002 MASTSGTKGPSLMSRQPSRRMTRATTRTVELPNEENIRDSEIVPSSLAVLVPILRAALEIEEENPRVAYLCRFHAFEKAHTMDPQSSGRGVRQFKTYLLHKLEREGELTEKKAKRSDARELQSYYQSFYEKRILRDGEFTTKPEEMVKNVQIATVLYEVLKTMVQSIDEKTRRYAEDVENKRGQYEHYNILPLYAVGVKPAIMELPEIKAAIYALRKVDYLPKPIIRSIPDASNDDSTMPTERVKNVTDILDWIASTFGFQKGNVANQREHLILLLANLDMRNRTEPSGLREETVEKLMATTFKNYESWCHYVRCKSNLRFPDGLDKQQLELIYIALYLLIWGEASNIRFMPECLCYIFHHMCDDIFGILYSNAHRVSGDGYQIQARDDERFLREVITPLYEVLMKEAKRSNKGKASHSSWRNYDDLNEYFWSDKCFKLGWPMNLNADFFRHTDETQTAHHGPSQASTVAGKKKPKTNFVEVRTFLHLYRSFDRMWIFFILALQAMIIIAWSSLGPVGVLSDPDVFRNVMTIFITYAFLNFLQATIDIILTWNALRNMKFTQLVRYLLKFAIAAVWVVVLPVSYSSSLQNPSGLIRFVTSWAGDWGNQSLYTYVVALYLVPNIVAAILFFLPPLRRILERSNMRIITLLMWWAQPKLYVGRGMHEGTLSLLKYTLFWIMLLITKLAFSYYVEILPLVGPTKVIMRMHIDNYQWHEFFPENEIHNICVVIAIWAPIILVYFMDTQIWYAIYATLFGGIVGAFSHLGEIRTLGMLRSRFQSVPLAFSQRFWTGRNIKNIQEGMDDSYERDNISYFSQVWNEFINSMREEDLISNRDRDLLLVPYSSVDVSVIQWPPFLLASKIPIAVDMAKDYKKDDDAELFRKITNDGYMYSAVVECYETLKDIILNLLRDAEDRMIIERICHKVEVCIDQEKFVKEFKMSGLPSLSEKLEKFLSLLRSEDGKLESQIVNVLQDIVEIIIQDVMFDGNVILQTPQHYIGERGQRFVNIDTSFTQKKSVMEKVIRLHLLLTVKESAINVPQNLEARRRTTFFANSLFMNMPKAPKVRDMLSFSVLTPYYKEDVLYSDEELNKENEDGISILFYLTKIYPDEWANLHERIKSENPEDDKAELIRRWASCRGQTLYRTVRGMMYYWQALILQWMIEYAEDDADFYEIDNRLLERAHALADLKFTYVVSCQLYGSQKKSKNTRDRSSYTNILNLMLNHSALRVAYIDETEDTKGGKKVYYSVLVKGGDKYDEEIYRIKLPGPPTEIGEGKPENQNHAIIFTRGEALQTIDMNQDNYYEEAFKMRNVLEEFHKGHRGQRKPTILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRILANPLRVRFHYGHPDIFDRIFHITRGGISKASKVINLSEDIFAGFNSTLRQGFITHHEYIQVGKGRDVGMNQISLFEAKVANGNGEQTLSRDVYRLGRRFDFYRMLSFYFTTVGFYFSSMITVLTVYVFLYGRLYMVLSGVEREILLSPNIHQNKALEQALATQSVVQLGLLLVLPMVMEIGLEKGFRTALGDFIIMQLQLASVFFTFQLGTKAHYFGRTILHGGSKYRPTGRGFVVFHAKFAENYRMYSRSHFVKGLEILLLLIVYEVYGESYRSTSLFFFITISMWFLAISWLFAPFLFNPSGFDWQKTVEDWTDWKRWMGNRGGIGIPSDKSWESWWDEENEHLKYSNIRGKILEIILAFRFFIYQYGIVYHLNITHRSKNIMVYGLSWAVLVIVLIVLKLVSMGRRKFGTDFQLMFRILKALLFLGFLSVMTVLFVVCALTISDLFAAILAFMPSGWAIILIAQTCRGLLKGVKLWASVKELSRAYEYVMGLIIFMPTAVLSWFPFVSEFQTRLLFNQAFSRGLQISMILAGKKDTFKTE* 1905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03008 1904 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 249 1896 - -
Rops11g03008 1904 Pfam Vta1 like 51 171 IPR039431 -
Rops11g03008 1904 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 332 441 IPR026899 -
Rops11g03008 1904 MobiDBLite consensus disorder prediction 1 27 - -
Rops11g03008 1904 SMART FKS1_dom1_2 329 444 IPR026899 -
Rops11g03008 1904 Gene3D - 35 183 IPR023175 -
Rops11g03008 1904 Pfam 1,3-beta-glucan synthase component 1037 1126 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Rops11g03008 1904 Pfam 1,3-beta-glucan synthase component 1130 1718 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03008 Rops-Chr11 52988864 53013222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03008 1 1899 Glycosyltransferase AT1G06490 69.943 0.0 2739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03008 K11000 - gmx:100815000 3232.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03008 11 52988864 53013222 Rops11g03008 11 52988864 53013222 ECH