Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02904 ATGGCTTCTATCACATGCATCACCCACCAACCCATCACTTCAAGTTATAAGGCCTTTCCTTCACCAGTTTCTTCCTCAAACTTGGCTTCTCGGTTTCTGGGAACCAGAAAAAGAGTTGGGTGGCTGAGGCTCACCTCTGAAATTGGACCCTCCAACGGTTCCAAAGCCACATGCTGGTTCAAATTTGGTAAGAATGGTGTTGATGCTGAAGGTGCTGGGATTTATGGCAGCCAGTCACGTGATGATTTTGATAGAGATGATGTTGAACAGTACTTCAACTATATGGGGATGCTTGCTGTTGAGGGCTCATATGATAAGATGGAGGCTCTTCTAAGCCAAAACATCCACCCCGTGGATATACTGTTGCTGTTAGCTGCCTCAGAAGGTGACAAGCCAAAGATTGAGGAACTCTTGAGAGCAGGAGCAAATTATGATGTGACAGATGCAGATGGACGAACAGTACTGGACAGAGCTAATGATGAAATTAAAGATTTCATTCTTAATTTTTCAGTGCAGAAGGCATGA 525 0.4438 MASITCITHQPITSSYKAFPSPVSSSNLASRFLGTRKRVGWLRLTSEIGPSNGSKATCWFKFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGSYDKMEALLSQNIHPVDILLLLAASEGDKPKIEELLRAGANYDVTDADGRTVLDRANDEIKDFILNFSVQKA* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02904 174 Gene3D - 78 172 IPR036770 -
Rops11g02904 174 SUPERFAMILY Ankyrin repeat 97 167 IPR036770 -
Rops11g02904 174 FunFam Protein LHCP TRANSLOCATION DEFECT 82 173 - -
Rops11g02904 174 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 174 IPR044242 GO:0006886|GO:0009570|GO:0090391
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02904 Rops-Chr11 50753081 50755884 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02904 - - gmx:100499940 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02904 11 50753081 50755884 Rops11g02904 11 50753081 50755884 ECH