Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02896 ATGGAGGAGGCATCACCTGAAGCCATCATTGAAGTTAGAGAAGAGCTAATGGTTTCACCATCATCTGGTGGAAACCCAGCTCTCAGAACTGCCTATTTTCTCATACCTTGCATCCAAGACTCACCTCCAGACTCTCTTCTCCCTCATCATTCCAAATTCTCTGGAACGGTCACTTTCAATTCCAACCATGCAAAGGTGACACCAAAACGATGGTGTTCCAAGACCAACACTTTCGTTTTCCCTTGGGGAGAAGCAACCATCACATTAGAAGACATGAAGGCTTGCTGGGGTTACTCTGTTTTGGGAGGTCCTGTTTCTAGCCCTCTTGAGATCAGTGACCAAGAGGAAACGGAAGCACAACTAATTGAATTGAGAAGAATGTTTTTCAGATCTAAAGCCAGAAGGGTAGACCAAAGCCCATGGATGAAGCATTTCATGATGAATGAAAGCCAAGTGGAGCATGAAGGGTTATTGTCTTTGTGGTTGTCAAGGTTTGTTTTCCCTTCTAAATCATATGATTCCATTTTGAAATGTGTTTTTCCTATTGCCATACATCTAGCAAGAGGGACTCAAATAGCTCTAGCACATGCTGTTTTAGCAAGCATTTACAGAGATTTGAGTTTGTTGAAGAACAACATCAAAAATGCCAAAAAAACTAAATTGGGGGTTACTCTATGGGCTCCTTTTCAGTTGGTCCAATTGAAACTCACTTTGGATTCTGCTGGAACTAGGAATGGCTTTCTATGGCGCCTATACAAGAATTATGCATCCTTTGATCTTAACAATGGAAAAGAAATGTGGGGATGTGATAATCCTTGTTTGGATGATGAATTAGAGGCCTTTGCTCACTGCTTAAGGGTCTCTGAGTTGGTGGGTATGGAGTGTACAAAGAAGTACCTCCCACATCATGTTGCAATGCAATTTGGGATGGATCAGGAAATTCCTGAGATGGTTGCTCCTTGTAACAAGGATCCTTGGATGAGTTATAGCAAGCCAGTAAAGGATATGAATTTGAGGATTGCATTAGGTTCCAACGAGCCAAGTGTTACTAGTAGCTCAAAACATTTGTCACTAGCTTCATCTGGGCATGTAGAAGGTGAAGGATCTCATAACCCACCACCTGGTTTTACTTCCAAGTTTGAGAGAGATCAAATAGGGGATTTTGATAAAGAGGATGAGTTGTCAATTAATGAAATATCGAGTTCTTCTAGTGAAGCTACATGTTTTGATGATGAAGTCGTTGGAAATGGTAAGGCTTTGTCTAATCCTCGATCTGATGTTTTCCCATCGTCAAGTATGGGTGATGAAGCAGCTGGATCAAAAAGTAAGGATATTCATAGAGGATCAAAATGTACCATAGATTATGGTCAAACAGAAGATGTTGTTGGGGGAGCAAGAAGGGCCAAGGATGATGGAAATGAAGCCAAAATCAAAAGTCCATTTTGTGATAGAAATGGGATCAATGACATAGCATTCAATCTTGAAAACCGGATTTGGAAGCTTGAAAGAGTGGTTGCTAAGCTTAAAGCAGCGAGGTTTAGCCCTAAGGTTGAAAATATTGGAACCAAAGCCAAGCCATAG 1581 0.4118 MEEASPEAIIEVREELMVSPSSGGNPALRTAYFLIPCIQDSPPDSLLPHHSKFSGTVTFNSNHAKVTPKRWCSKTNTFVFPWGEATITLEDMKACWGYSVLGGPVSSPLEISDQEETEAQLIELRRMFFRSKARRVDQSPWMKHFMMNESQVEHEGLLSLWLSRFVFPSKSYDSILKCVFPIAIHLARGTQIALAHAVLASIYRDLSLLKNNIKNAKKTKLGVTLWAPFQLVQLKLTLDSAGTRNGFLWRLYKNYASFDLNNGKEMWGCDNPCLDDELEAFAHCLRVSELVGMECTKKYLPHHVAMQFGMDQEIPEMVAPCNKDPWMSYSKPVKDMNLRIALGSNEPSVTSSSKHLSLASSGHVEGEGSHNPPPGFTSKFERDQIGDFDKEDELSINEISSSSSEATCFDDEVVGNGKALSNPRSDVFPSSSMGDEAAGSKSKDIHRGSKCTIDYGQTEDVVGGARRAKDDGNEAKIKSPFCDRNGINDIAFNLENRIWKLERVVAKLKAARFSPKVENIGTKAKP* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02896 526 MobiDBLite consensus disorder prediction 345 381 - -
Rops11g02896 526 MobiDBLite consensus disorder prediction 345 359 - -
Rops11g02896 526 Pfam Plant mobile domain 236 351 IPR019557 -
Rops11g02896 526 Pfam Plant mobile domain 69 234 IPR019557 -
Rops11g02896 526 Coils Coil 199 219 - -
Rops11g02896 526 MobiDBLite consensus disorder prediction 414 449 - -
Rops11g02896 526 PANTHER PROTEIN MAIN-LIKE 2 69 389 IPR044824 GO:0010073|GO:0048507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02896 Rops-Chr11 50680009 50686981 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02896 - - ccaj:109805304 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02896 11 50680009 50686981 Rops11g02896 11 50680009 50686981 ECH