Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02882 ATGGCATCGCCCAGTTTCTCACAGCAGCTCCCATCTCACATTGATCCTGAGGAACTGGAATATATCGAAGACGAACAGTTCTTCGAGTTAGTGATGGAAGCCAAATGGGAAGCAGTTGCTTACTTGTATCGAAATAAGAGTGAGTTTCACAAGAAAGATGTGAAGGAAAGAGGCTCCGCATTGCACATGGCTGTGAACGATGACAACGAGGATGCTGTGAAAAGTCTCGTGGAAGCAATCTTATTGCAAGAAGGAAATGAATCTGTGGTTGTAGAAGAAAATGAAGTAACGTGGAAAAAAAGCGCACTAGGGTGGCAGAATAAGCAAGGGGCCACTCCTCTGCACTATGCAGCACTTAGAGGGTTCACGAATATATGCAAATGCATCATAGGAGAGAAAGGGGAAAGGAACCATTTGATTGGAATTAAGAACAAAGAGGGCGAGACGCCTCTCTTCTGGGCTGTGCTCGCTGGCAGAAAAGAAACCTTCAAGTACCTCCACGATGTTTCTACAAAGGATTTCAATAGTCTGATTACAAACAATGATAGCATCCTTCACTGTGCCATTTGGAGAGAATTTTTTGATTTGGCAGCATTCATACTTCATAACTGTGGTGGACTTTCCGACCTTAGGAACAAATATGAAGTCACTCCTCTCGAAGTTCTTGCCACTAGGCCTTCGGCCTTCATGAGTGGAAGCAATCTCTCATGGTGGAAGCGAATTATCTACTATTGTATATCTGTAGACGAAAGTGAAATGAAATCGTATTCAAAGGAGAAAAAGGATACGTCTGAGAGTGTTGGAAACAAAGAGAAAGATCAGAGTCATGTATCGATATCCCTGTGCCCAGTTCTTCAGAACTCCCTTGAATCAGTCAAAGAAGACGAAGCACGATATAATCTTGTTCCACCAACTTGTGTTACCTTTTTTCGGTTTGTGTACAATAGTCTTAAGCTAGTATTCAGTATCTCAGGAGTGGACTTAGAGGCAATTGAGAAGATGAAGCAGAAGCACATGTGGGGTGGGCATCTCTTGAACCAATTTATGAAAAACCCTTATGAGTCCTACATAGGAAATTACGGGGACACTCCAGATGCGGAGAACACGGCGCAATTCTTTGAAGGTCATTTTGCAAATATTGCCAACAAGAAGACAGCTAGCTCCATGCCGAAGCCAGGGGAAGAAAATAAGGAAAAGGAGACAACATTTTTGGCTGTAGCAAAATCTGGCGTTGTTGAAATAATGGATGAGCTTAATACTAAAATACCAAGTGGCCCCCAGGACGACACGTCTGACAAGAAAGGCTTATTGCTAGTGGCAATGAAGAATATCCAAACCGATTTTGCAGGAAAAGCTGATAAAAAGGAGACAGCATATTTGGCTGCAGCGAAAAATGGCATAGTTGAAATTGTGTTTGCGCTTCAATCTCAAATAAAAAGTGCTATTCATGACACTAACTCTAACAAGGAAAATGTATTGCTTGTGGCAGTGAAGAACAGGCAACCCCTTGTTGTTGAGAAATTGAAGGAGAAGTTGAATCGGAAACAGTTCGAAGGTCTAATTTATCAAACTGATGACAGGGACAACAATGTGTTACACTTGGCAGCAGGTGCAGTAAGCAGCAATGCAAAGACTTGGCAGATTGCTGGCGCAGCCATGCAAATGATGTGGGATATCAAGTGGTACAAGTACATCAAAACACTAGTGCCGGAGCATTTCGCTTTTAGGAACAACAAAGATGGCAAAACCCCAGGAGAAATCTTCAAGGAGCAACATAAAGAACTTGTGAAAGAGAGTTCTGAGTGGATGAAGGAAACATCGGAATCTTGCTCGGTTGTGGCGGCACTTATAGCCGGAGTTTCCTTTGCGACAGCGAGCACTGTCCCCGGCGGCAATGAGGATAATGGTAAACCTGCGTTGGAAGGCCAACCTGCATTCGACGTATTCGCCATAGCTTCCCTTGTTGGACTTTGCTTCTCTGTCAGTGCATTAGTAATGTTCCTTGCCATACTCACTTCTCGAAAACAAGCCGAAGACTTCAATAGAAGTTTGCCAGTGAAACTTCTCTTGGGCTTAAGTTCTCTCTTCATATCCATTGCTTCAATGCTTATTGCTTTCTGTGCTGGCCATTTCTTTGTGCTCAAGGACAAATACAAGACTGTCTTATTCCCTATCTATGTTGCCACTTGCTTGCCTGTGACTTTCTATGCGGTAGTGCAGTTTCCATTATACGCTGATCTTGTTAAAGCTATTTTCAAGAAGATACCACCGACAAGTGGTACGGGCGTTCGATTATAG 2298 0.4312 MASPSFSQQLPSHIDPEELEYIEDEQFFELVMEAKWEAVAYLYRNKSEFHKKDVKERGSALHMAVNDDNEDAVKSLVEAILLQEGNESVVVEENEVTWKKSALGWQNKQGATPLHYAALRGFTNICKCIIGEKGERNHLIGIKNKEGETPLFWAVLAGRKETFKYLHDVSTKDFNSLITNNDSILHCAIWREFFDLAAFILHNCGGLSDLRNKYEVTPLEVLATRPSAFMSGSNLSWWKRIIYYCISVDESEMKSYSKEKKDTSESVGNKEKDQSHVSISLCPVLQNSLESVKEDEARYNLVPPTCVTFFRFVYNSLKLVFSISGVDLEAIEKMKQKHMWGGHLLNQFMKNPYESYIGNYGDTPDAENTAQFFEGHFANIANKKTASSMPKPGEENKEKETTFLAVAKSGVVEIMDELNTKIPSGPQDDTSDKKGLLLVAMKNIQTDFAGKADKKETAYLAAAKNGIVEIVFALQSQIKSAIHDTNSNKENVLLVAVKNRQPLVVEKLKEKLNRKQFEGLIYQTDDRDNNVLHLAAGAVSSNAKTWQIAGAAMQMMWDIKWYKYIKTLVPEHFAFRNNKDGKTPGEIFKEQHKELVKESSEWMKETSESCSVVAALIAGVSFATASTVPGGNEDNGKPALEGQPAFDVFAIASLVGLCFSVSALVMFLAILTSRKQAEDFNRSLPVKLLLGLSSLFISIASMLIAFCAGHFFVLKDKYKTVLFPIYVATCLPVTFYAVVQFPLYADLVKAIFKKIPPTSGTGVRL* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02882 765 SMART ANK_2a 488 518 IPR002110 GO:0005515
Rops11g02882 765 SMART ANK_2a 56 85 IPR002110 GO:0005515
Rops11g02882 765 SMART ANK_2a 146 176 IPR002110 GO:0005515
Rops11g02882 765 SMART ANK_2a 180 209 IPR002110 GO:0005515
Rops11g02882 765 SMART ANK_2a 109 138 IPR002110 GO:0005515
Rops11g02882 765 Pfam Ankyrin repeats (3 copies) 61 167 IPR002110 GO:0005515
Rops11g02882 765 Pfam Domain of unknown function 601 713 IPR026961 -
Rops11g02882 765 Gene3D - 22 248 IPR036770 -
Rops11g02882 765 Gene3D - 395 619 IPR036770 -
Rops11g02882 765 PANTHER CASKIN 58 753 - -
Rops11g02882 765 SUPERFAMILY Ankyrin repeat 28 511 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02882 Rops-Chr11 50484375 50491531 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02882 451 762 Miscellaneous Gene Families AT3G12360 23.757 2.16e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02882 - - gmx:100813041 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02882 11 50484375 50491531 Rops11g02882 11 50484375 50491531 ECH