Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02863 ATGGCACAGTACATCAACGACCTAGTGCCGAAGCATTTTGCTTTTAGGATTAACAAATACGGTAAAACCCCAGGAGAAATCTTCAAGGAGCAACATGAAGAACTAGTGAAAGAGAGTTCTGAATGGATGAAGGAAACATCGAATTCTTGCTCGGTTGTGGCGGCACTCATCGCTGGTGTTTCCTTTGCGACAGCTAGCACTGTCCCCGGTGGCACCGAAAATGGTAAACCTTCATTGGAAGGCCAACCGGCATTCGACGCATTTGCCATAGCTTCCCTTGTTGGACTTTGCTTCTCTGTCACTGCACTGATAATGTTCCTTGCCATACTCACTTCTCGAAAACAAGCTGAAGACTTCAAAAGAAGCTTGCCAATTAAACTTCTCTTTGGTTTAAGTTCTCTCTTCTTATCCATTGCTTCGATGCTTATTGCATTCTGTGCTGGCCATTTCTTTGTGCTCAAGGACAAATACAAGAGCATTCTATTCCCTATTTATGTTGCCACCTGCTTACCTGTGACTTTCTTTGCGGTAGTGCAGTTTCCATTATACGCTGATCTTGTTAAAGCTATTTTCAAGAAGATGCCACCACCACCAAGTGGTAAGGGCGTTCAATTATAG 618 0.4369 MAQYINDLVPKHFAFRINKYGKTPGEIFKEQHEELVKESSEWMKETSNSCSVVAALIAGVSFATASTVPGGTENGKPSLEGQPAFDAFAIASLVGLCFSVTALIMFLAILTSRKQAEDFKRSLPIKLLFGLSSLFLSIASMLIAFCAGHFFVLKDKYKSILFPIYVATCLPVTFFAVVQFPLYADLVKAIFKKMPPPPSGKGVQL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02863 205 Pfam Domain of unknown function 41 152 IPR026961 -
Rops11g02863 205 PANTHER CASKIN 7 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02863 Rops-Chr11 49863271 49863888 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02863 14 193 Miscellaneous Gene Families AT5G54710 24.468 6.74e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02863 - - lja:Lj0g3v0362609.1 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02863 11 49863271 49863888 Rops11g02863 11 49863271 49863888 ECH