Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02812 ATGAGAAGGAGGCCTGGAATTGGAGGTTTGCAAACAGCTGCTGCTGCAAGGGATCAGTATCGTTTGCTTGGTGAGAATGTAGCCAAGATCAGAACTGATATGATGAAGGAGCAACTTGCCACGTTTCGTTCTCAGCTTGAAGACTTTGCTCGCAAGCACAAGAATGACATCCGCAAGAACCCTGCATTCAGATCACAGTTTCATGAGATGTGTGCTAAAGTTGGAGTAGATCCCTTGGCCTCAAATAAGGGTTTCTGGGCAGAGCTTTTAGGAATTGGTGACTTCTATTATGAACTTGGAGTTCAAATTGTGGATATTTGCTTGGCCACTAGACCTCACAATGGAGGACTTATCAACTTGCAGGAACTCTGTCATCTCCTTCGCCAGAGACGAAAAAGTGATCGTGGAGTTGTTTCTGAGGATGATTGCTTGCGTGCTATCAGTAAACTTAAGGTACTGGGTAGCGGTTTTGAAGTTATATCTGTTGGAAAGAGAAAACTTGTTCGTTCTGTTCCAACAGAGTTGAACAAAGATCACAATGAAATTCTAGAGCTTGCCCAGGCTCAAGGTTTTGTGACTGTCAATGAAGTAGAGAGACGGCTATCTTGGACTTCGGGTCGTGCCATTGATGCCCTTGATACGTTACTTGATGAGGGACTTGCAATGATTGATGATGGCCATAGAGATGGTAAACGAAGGTACTGGTTTCCATGTGTATCTCCCATCTCATCTTCAATAGGAATTGATTCCTAA 753 0.4382 MRRRPGIGGLQTAAAARDQYRLLGENVAKIRTDMMKEQLATFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPHNGGLINLQELCHLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVISVGKRKLVRSVPTELNKDHNEILELAQAQGFVTVNEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHRDGKRRYWFPCVSPISSSIGIDS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02812 250 Pfam EAP30/Vps36 family 6 225 IPR040608 -
Rops11g02812 250 FunFam Vacuolar-sorting protein SNF8 91 171 - -
Rops11g02812 250 PANTHER EAP30 SUBUNIT OF ELL COMPLEX 1 240 IPR016689 GO:0000814|GO:0071985
Rops11g02812 250 Gene3D - 91 171 IPR036388 -
Rops11g02812 250 Gene3D - 24 85 - -
Rops11g02812 250 Gene3D - 172 248 IPR036388 -
Rops11g02812 250 FunFam Vacuolar protein sorting-associated protein 172 250 - -
Rops11g02812 250 SUPERFAMILY "Winged helix" DNA-binding domain 24 174 IPR036390 -
Rops11g02812 250 PIRSF ESCRT2_Vps22 1 245 IPR016689 GO:0000814|GO:0071985
Rops11g02812 250 SUPERFAMILY "Winged helix" DNA-binding domain 175 238 IPR036390 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02812 K12188 - cave:132176452 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02812 11 48710378 48717772 Rops11g02812 11 48710378 48717772 ECH