Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02800 ATGGGTTGCAGAAACAGGGACTTGTTCACAGAGGATCACACTTCTCCTTCTTCTTCACTGAGCGAGGCCTTGCTCTTCACCACCATGTGCATCATTGGCCACCCAGTTGACGTTTACGTTAAAGATGGTTCTGTCTATTCTGGAATCTTCCACACTGCTTCTGTTGACTCTGATTACGGTATTGTTTTGAAGAAAGCAAGGATGACCAAGAGGGGAAAGGGCAGCACCAATGTGGGAAAGGATGGCTTGGTAGATACGCTAGTGATTCTATCCGGTGATCTTGTGCAAGTTGTTGCCAAGGGAGTAATGCTACCTGCAGAGGGGGTTGGTGGCAATATAACTGGTGATGATGAGGAAGCTGTTGTGCACAATGTTTGTTGCTCTGAGAGTCTAACATGTGGGACAGAGAATCGTACAGGACCTTTGATGGATGCAGAACAGGTTAATCAATCAAGACAAGCTGAGGATGACAACTCAAAAGGGAAAGCTGATAACTGCAGACAGAAGTCTGAGTTTGTTAATGAAAAAATTGATGAAAAGATTCAAAGCCTCAATCTAGGCCATGCAATTGATACATGTCTTGGCCAAGGGGAAGCTGGCGAACATGGAAGCTCTGATATGACATCAAGTCCTTCTGATAATGGAATATGCTGCAATAATGCTCCTGCATCTGCTAAAGTCAATGATCAGTGTAGTGTAAGGTCTACTTCAGCAGACTCTGCTTCTACGAATTCCACCCAAGGTGTGGATCTGATCAATAATTTGCCAGCAAATTCTGTTGAAATATCTGCCCTGAGGGGCGCAGATTCTACCAGAAATGTTAAGGAATTTAAGCTCAACCCAGCTGCCAAAATTTTCTCCCCATCTTTTGTAAATCCTATTTCATCAACTGCTGCTGTACCAACTACTGTCATCCCAACTACTGCAAACATGGTTTACATACCAAATAGCTCTCCTATGATACCTGTTGCAACTATTCAACCAGAAGTTGCATTCAATACGTTTGCTTCTCGACCTTCTGTCCCTGTCAAAGTTGCACATTATAGTAATTTGACAGTGGGAAATAGTGGCAGTGGTTCTCAATTTTCACAACCAATTGTTGGACAACTGGCACATAGGACACAACCTCTACGGTATGCTGCACATTACACTCCTGTTTTGTCTGAACCTGCTTATTTGCAACCAAGCTCTCCTGCTGTTATGGTTGGACGCTCCACCCAGTTAGTCTATGTTCAGCCAGTTTCCCAAGATTCGATTCATGGTGCAACGGCTATCTCACCATTCTCAGCACGTCCTCTGTTGAATCATGTACAGTTTCCAAAGCAGCAAGGAGGAACAGTTGGTCAAGCAATGCCAGTTTGTGCGCCCCCACCAGTCCTAACAAGTGGACAACAACCTTTTGCACTTCAAAGTCACATTCCTCTTTTGCAACCTGGCTTTCCTGTAACTAGACCTATTTCAGTCCCAGGGCCAAATGGTTTCTATGGCACTAAGTTTTCTTGA 1503 0.4424 MGCRNRDLFTEDHTSPSSSLSEALLFTTMCIIGHPVDVYVKDGSVYSGIFHTASVDSDYGIVLKKARMTKRGKGSTNVGKDGLVDTLVILSGDLVQVVAKGVMLPAEGVGGNITGDDEEAVVHNVCCSESLTCGTENRTGPLMDAEQVNQSRQAEDDNSKGKADNCRQKSEFVNEKIDEKIQSLNLGHAIDTCLGQGEAGEHGSSDMTSSPSDNGICCNNAPASAKVNDQCSVRSTSADSASTNSTQGVDLINNLPANSVEISALRGADSTRNVKEFKLNPAAKIFSPSFVNPISSTAAVPTTVIPTTANMVYIPNSSPMIPVATIQPEVAFNTFASRPSVPVKVAHYSNLTVGNSGSGSQFSQPIVGQLAHRTQPLRYAAHYTPVLSEPAYLQPSSPAVMVGRSTQLVYVQPVSQDSIHGATAISPFSARPLLNHVQFPKQQGGTVGQAMPVCAPPPVLTSGQQPFALQSHIPLLQPGFPVTRPISVPGPNGFYGTKFS* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02800 500 Pfam Ataxin 2 SM domain 22 100 IPR025852 -
Rops11g02800 500 PANTHER ATAXIN 2-RELATED 157 464 IPR045117 GO:0003723
Rops11g02800 500 MobiDBLite consensus disorder prediction 150 168 - -
Rops11g02800 500 CDD Sm_like 32 98 - -
Rops11g02800 500 MobiDBLite consensus disorder prediction 147 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02800 Rops-Chr11 48396495 48408086 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02800 - - gmx:100809285 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02800 11 48396495 48408086 Rops11g02800 11 48396495 48408086 ECH