Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02797 ATGAGTGTGGTGGGGTTTGACATTGGTAATGAAAACTGTGTCATTGCTGTGGCAAAGCAACGTGGGATTGATGTTTTGTTGAATGATGAATCCAAACGTGAAACCCCTTCTGTGATCTGCTTCGGCGAGAAGCAACGGTTTTTGGGGTCTGCTGGTGCTGCTTCTGCTATGATGCACCCAAAGTCCACCATATCTCAAGTTAAGAGATTGATAGGCAGGAAATTTTCGGACCCTGATATGGAAAAAGAGCTGAAAATGCTCCCTGTTGAAACTTCTGAAGGCTCTGATGGTGGCGTTTTGATTCACTTGAAATACTTGGAGGAGACTTATACATTTACCCCGGTTCAAATAATGTCCATGCTTTTTGCTCACTTGAAGACTATGACAGAAAAAGATTTGGGGACACCAATCTCGGATTGTGTTATTGGGATCCCGTCATACTTTACCGACTTGCAGAGACGGGCATATCTTGATGCAGCAGAAATTGCTGGGTTGAAGCCTTTGAGATTGATCCATGATTGTACTGCAACTGCCCTTAGTTATGGGATTTACAAAACAAATTTTCAAAGTGCAGGTCCAAGTTATGTTGCATTTATTGACATTGGTCAGTGTGATACTCAGGTCTCAATTGCAGCATTTGAGTTTGGGCAAATGAAGATACTTTCACATGCTTTTGACAGGAGCTTAGGGGGGAGGGACTTTGATGAGGTTCTATTTAGTCATTTTGCAGCAAAATTTAAGGAACTTTACAGTATTAACGTGTATTCTAATGCCAAGGCATGTATTAGGCTGCGTGTAGCATGTGAGAAATTGAAGAAAGTTTTGAGTGCAAATCTAGAGGCTCCTCTAAGTATTGAGTGCTTGATGGATGAGAAAGATGTTAAGGGCTTTATAACGAGGGAAGAATTTGAGAAGCTGGCATCTGGATTACTGGAGAGAATTTTGATTCCTTGCAGCAAAGCATTATTTGATGCAGGCTTGACTGCAGATAAGATTTCTTCTGTAGAGCTGGTTGGTTCAGGTTCTAGGATTCCAGCTGTAAGTACATTATTAAGTTCTCTATTCAAGAGAGAACCCAGCCGAAAGCTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTACAGTGTGCAATGCTCAGTCCTGCATACCGTGTGAGAGAATATGAGGTCCAGGATGCTATTCCTTTTTCAATTGGACTTTTGTCTGATGAAGGTCCAATTTCTGCAGGATCAGATGGTGTACTTTTCCCAAAAGGCCAACCAATTCCAAGTGTTACAGTCCTAACACTTCAGCGAACTAATTTGTTCCATTTGGAAGCCTTCTATGCTAATCCAAATGAACTACCACCTGGGACATCTCCGAAAATTAGTTGCTTCATGATTGGTCCTTTCCATGGATCCCATGGCAGTAAAACAAGAGTTAAAGTTAGAGTTAAACTAAATCTGCATGGCATTGTCAGTGTTGAATCAGCTACATTGATTGAGGATCACATGGATGATTCAGTTATAGCAGGCGATCTTCATTCAGGTTCTGATGCAATGGATATTGATTCCATGCCTGAGGCAGTTGCCAATGGCGTTGAAGATAGTACCAATAGGAAGTTTGAATCTCCAGGAAGTTCTGCTGATGGTACAAGAAAAGATAAAGCTAACAGAAGGCTTGATGTGCCAGTAAATGAGAATATATATGGTGGAATTACAAAGGAAGAGATTTTGGAAGCTCATGAAAAAGAACTCCAGTTGGCCCAACAAGACAAAGCTGTGGAGCTAACCAAAGAAAGGAAGAATACCTTGGAGTCTTATGTCTATGAGATGAGGAGTAAGCTCTTCAATACATATCGGAGCTTTACAAGTGAACAAGAGAGGGATGACATATCTAGGAGCCTGCAAGAGACTGAGGATTGGCTTTATGAGGATGGTGACGATGAAACTGAACATGCTTATTCTTCAAAACTGGAAGATCTGAGAAAGCTGGTGGATCCAATTGAGAATCGGTATAAAGAGGAAGAAGGAAGAGCACAAGCTATAAGAGATTTATCAAAGTGCATTTTAGAGTATCACACGGCTGCAGATTCCCTTCCACCTCAGGATAAGGAACTGATCATCGATGAGTGCAATAAAGCAGAGCAGTGGCTAAGAGAGAAGATGCAACAACAAGATTCTTTTCCTAAGAATGTTGACCCGATATTATGGTCAAGTGATATTAAGAGCAAGACAGAGGATTTTAACTTAATATGCCAACGGATATTGGAATCCAGAGCTTCTCCAACTCCAGAAGACAATGACAAAGACAAGCTGGATTCTTCCAATCATCCATGA 2322 0.4134 MSVVGFDIGNENCVIAVAKQRGIDVLLNDESKRETPSVICFGEKQRFLGSAGAASAMMHPKSTISQVKRLIGRKFSDPDMEKELKMLPVETSEGSDGGVLIHLKYLEETYTFTPVQIMSMLFAHLKTMTEKDLGTPISDCVIGIPSYFTDLQRRAYLDAAEIAGLKPLRLIHDCTATALSYGIYKTNFQSAGPSYVAFIDIGQCDTQVSIAAFEFGQMKILSHAFDRSLGGRDFDEVLFSHFAAKFKELYSINVYSNAKACIRLRVACEKLKKVLSANLEAPLSIECLMDEKDVKGFITREEFEKLASGLLERILIPCSKALFDAGLTADKISSVELVGSGSRIPAVSTLLSSLFKREPSRKLNASECVARGCALQCAMLSPAYRVREYEVQDAIPFSIGLLSDEGPISAGSDGVLFPKGQPIPSVTVLTLQRTNLFHLEAFYANPNELPPGTSPKISCFMIGPFHGSHGSKTRVKVRVKLNLHGIVSVESATLIEDHMDDSVIAGDLHSGSDAMDIDSMPEAVANGVEDSTNRKFESPGSSADGTRKDKANRRLDVPVNENIYGGITKEEILEAHEKELQLAQQDKAVELTKERKNTLESYVYEMRSKLFNTYRSFTSEQERDDISRSLQETEDWLYEDGDDETEHAYSSKLEDLRKLVDPIENRYKEEEGRAQAIRDLSKCILEYHTAADSLPPQDKELIIDECNKAEQWLREKMQQQDSFPKNVDPILWSSDIKSKTEDFNLICQRILESRASPTPEDNDKDKLDSSNHP* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02797 773 Pfam Hsp70 protein 3 667 IPR013126 GO:0005524|GO:0140662
Rops11g02797 773 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 600 IPR029047 -
Rops11g02797 773 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Rops11g02797 773 PRINTS 70kDa heat shock protein signature 2 15 - -
Rops11g02797 773 PRINTS 70kDa heat shock protein signature 332 348 - -
Rops11g02797 773 PRINTS 70kDa heat shock protein signature 363 383 - -
Rops11g02797 773 PRINTS 70kDa heat shock protein signature 388 407 - -
Rops11g02797 773 PRINTS 70kDa heat shock protein signature 30 42 - -
Rops11g02797 773 PRINTS 70kDa heat shock protein signature 472 488 - -
Rops11g02797 773 PRINTS 70kDa heat shock protein signature 140 160 - -
Rops11g02797 773 SUPERFAMILY Actin-like ATPase domain 193 381 IPR043129 -
Rops11g02797 773 Gene3D - 186 360 - -
Rops11g02797 773 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 569 667 IPR029048 -
Rops11g02797 773 FunFam Heat shock 70 kDa protein 16 isoform A 387 565 - -
Rops11g02797 773 FunFam Heat shock 70 kDa protein 4 567 677 - -
Rops11g02797 773 MobiDBLite consensus disorder prediction 526 554 - -
Rops11g02797 773 FunFam Heat shock 70 kDa protein 4 1 76 - -
Rops11g02797 773 PANTHER HSC70CB, ISOFORM G-RELATED 1 760 - -
Rops11g02797 773 MobiDBLite consensus disorder prediction 751 773 - -
Rops11g02797 773 Coils Coil 573 593 - -
Rops11g02797 773 Gene3D Actin; Chain A, domain 4 230 313 - -
Rops11g02797 773 Gene3D - 567 678 IPR029048 -
Rops11g02797 773 FunFam Heat shock 70 kDa protein 4 230 313 - -
Rops11g02797 773 Gene3D - 5 374 - -
Rops11g02797 773 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 563 IPR029047 -
Rops11g02797 773 MobiDBLite consensus disorder prediction 756 773 - -
Rops11g02797 773 CDD HSPA4_like_NDB 2 381 - -
Rops11g02797 773 FunFam Heat shock 70 kDa protein 4 112 191 - -
Rops11g02797 773 FunFam Heat shock 70 kDa protein 4 38 113 - -
Rops11g02797 773 Gene3D - 38 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02797 Rops-Chr11 48225160 48239441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02797 2 663 Miscellaneous Gene Families AT5G28540 29.835 2.83e-82 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02797 K09489 - gmx:100808218 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02797 11 48225160 48239441 Rops11g02797 11 48225160 48239441 ECH