Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02749 ATGAACAAGTTTAAGAAATCTCAAGTTCTAGTGCTCTTAGTTCTAGTTCCTCTTCTTGTCATAACACCCTGGTTACCTTCCTCTCTGAGGCCTACCTACTTGTACTTCATCTTAAACTTCATCATCATAGCACTAGGTGCTGAAGCTGGCCTCCTTTCAGTCCTTTTCAAGCCTATAGAAGACAGAAAGCAATCTGCTTCTGTGACCCCGAAACCTGTGATGACTCCAGAAGAAACTTCTGAGAAAAAGGGAGCTTCCATCCCTGCAGGTGCGATTGCTGTCTCAGAACATGTTGAAAAGTCAGCATCTGAGAGGGTTGTTTGTGTCACCAAAGTGGACAAGGTGCAAAAGGGTCCTTCAAGCCCTAGCCTTTTCTTCATAGGAAGTGGAGAAGCTGATGTAGAAATCATGGATGAAGAACTTGAAGCAGAAGAGGAGATTGGGGGAGTTAATGGGCAAGAGCTGTTTGCAAAAGCTGAGGCCTTCATTAGGAACTTCTACAAACAATTGAAGACGCAAAGAGAGGAGTCTTGGATTTATCAGAAATCCTTTTAG 555 0.436 MNKFKKSQVLVLLVLVPLLVITPWLPSSLRPTYLYFILNFIIIALGAEAGLLSVLFKPIEDRKQSASVTPKPVMTPEETSEKKGASIPAGAIAVSEHVEKSASERVVCVTKVDKVQKGPSSPSLFFIGSGEADVEIMDEELEAEEEIGGVNGQELFAKAEAFIRNFYKQLKTQREESWIYQKSF* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02749 184 PANTHER OS01G0532300 PROTEIN 1 179 - -
Rops11g02749 184 Pfam Cotton fibre expressed protein 153 178 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02749 Rops-Chr11 47349336 47350207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02749 - - gmx:100785054 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02749 11 47349336 47350207 Rops11g02749 11 47349336 47350207 ECH
Rops11g02749 11 47349336 47350207 Rops9g00319 9 4002879 4003672 PCT