Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02721 ATGTTCTTCTATACGGTCTTGTCTCGTTCATCCAGGACTGTGTGCCGAAGCTTCACGCTCTCCCATAATCTCTTCCATTCTCTAGTTCCCCAATCACCCAATAAGCTGATTCCAGTTCAAGTCAATTTGTTAAATTCTCCAATATGTTCATCCTTGACTCCAAGATTTGGATTTTCTTCATCTGACTCACCCGAACCTGCAAGTGATGACCCTGTGAAAACAAGTGAAGAACAACCTAAGGTAGCTGATCGGAGTGAACAAGCTGCATTCAAACCAAAGAATCAGGTTCCTGCTTCCTCTGTGACATCAGTCATTGATGGTTTGAGGAGACTCTACCTTCAGAAGTTGAAGCCTTTAGAAGTTACTTACCGTTTTAATGATTTTGTATCTCCTTTACTGACAAATGGTGATTTTGATGCCAAACCTATGGTTCTGCTTTTGGGTCAGTACTCAACTGGGAAAACAACATTTATTAAACATATGCTTAAAAGAAATTATCCAGGAGCTCATATTGGACCTGAGCCAACAACTGATAGGTTTGTTGCTGTCACGTTTGGACCTGATGAGAGAAGCATTCCTGGTAATACTGTTGCTATTCAAGCAGACATGCCATTTGGTGGTCTTACAAAATTTGGCACAGCTTTTTTGTCCAAATTTGAGTGTTCTCAAATGCCTCATCCTCTACTGGAGCACATTACATTTGTGGACAGTCCTGGAGTTCTGTCTGGAGAAAAGCAAAGGACACAAAGATCATATGATTTTACAGGTGTAACATCTTGGTTTGCTGCTAAGTGTGATTTAATACTCCTTCTGTTTGATCCTCACAAACTTGATGTCAGTGATGAGTTCAAGCATGTGATATCATCCCTAAGGGGGCATGATGATAAAATTCGAGTGGTTTTGAACAAGGCAGACCAAGTTGATACTCAGCAATTAATGAGGATTTATGGTGCATTAATGTGGTCACTTGGGAAGGTGATGAATACTCCTGAAGTCATGCGGGTGTATATTGGCTCCTTCGATGACAAGCCCGTAAATGATGCTGTCAGTCGTCCACTTGGTAATGAACTTTTTGAAAAAGAACAGGAGGACCTTCTTTCAGATCTGAAAGATATACCAAAGAAGGCTTGTGATCGAAAAATCAATGAATTTGTAAAACGAGCCCGTGCTGCCAAGATACATGCTTATATTATCGGCCATCTTAAAAAGCAGATGCCTGTCATAATAGGGAAAGCTAAAGCTCAGCAAATGCTCATTGATAACTTGGAGGGTGAATTTGCAAAGGTACAAAGAGAGTATCATCTACCTCCTGGTGACTTCCCAAATGTTGGTCAGTTCAAAGATATCTTGAGTGGTCACAACATTGACAAGTTTGTGAAATTAAAACCAAAAATGATGCAAGCAGTGGATGACATGCTTACTCATGACATTCCCAACCTTTTAAAGACTTATAGAAATTCCTATACCACCCCTGACCTCTTCAATAGATCTGCCACCACCATTAAAGGCGGAGCTGCCACTGCTGTCGACAGGGTATTGTCCCGTTCCTCAAAGACCGTGTGCCGAAGCTTCACGCTTTTCTCTGCTTCGCAGAAAACCCAACCCTTCTCCACTACCCTCTCCCATCACTTCCATTCCCTCGTTCCTCAATCACCCAATAAGCTGATTCCAATTCAAGTCAATTTGTTGAATCAGCCTGTAAGTTCTTCCTTGACTTCAAGATTTGGATTTTCTTCATCTGCCTCACCTGAACCTGCAAGTGATGACCCTGTGAAAACAAGTGAAGAACAACCTAAGGTAACTGATCAGAATGAACAAGATAAAGCTGCAGGTCAAGCTAAAGAATCAGATGTAGAGAGTGAATGTGATCTATCCAGGGATGATTTAATAAAGCTTCTTGCTGAGAAGGAAGGACTTTTGAAGTTGAAGCACAAAGAGATTGAGAAAATGCAGGATAAAGTGTTGCGTACTTATGCAGAGATGGAGAATGTCATGGACAGGACAAGACGCGAAGCAGTGAATTCGAAAAAATTTGCTATACAGAATTTTGCGAAGAGTTTACTAGATGTTGCTGACAATTTGGGAAGAGCTTCCTCAGTTGTGAAGGACAGTTTTTCAAAAATTGAATCACCTAATGACTCTGCTGAAGCAGCACAACTCCTGAAAACACTTCTGGAAGGTGTTGAAATGACTGAGAAACAACTTGCAGAGGTACTTAAGAAGAATGGTGTAGAAAAATTTGATCCTACAAATGAACCATTTGATCCGCACAGGCATAATGCCATCTTCCAACTACCTGATGCTTCCAAGCCCCCAGGCACTGTTGGAGTTGTTCTGAAGGTGGGATATATGCTTTATGATCGCGTTCTTCGTCCAGCGGAAGTTGGTGTAACGCAAGAAGTGGAGGATAACAATGCAGCTGAGTGA 2427 0.4149 MFFYTVLSRSSRTVCRSFTLSHNLFHSLVPQSPNKLIPVQVNLLNSPICSSLTPRFGFSSSDSPEPASDDPVKTSEEQPKVADRSEQAAFKPKNQVPASSVTSVIDGLRRLYLQKLKPLEVTYRFNDFVSPLLTNGDFDAKPMVLLLGQYSTGKTTFIKHMLKRNYPGAHIGPEPTTDRFVAVTFGPDERSIPGNTVAIQADMPFGGLTKFGTAFLSKFECSQMPHPLLEHITFVDSPGVLSGEKQRTQRSYDFTGVTSWFAAKCDLILLLFDPHKLDVSDEFKHVISSLRGHDDKIRVVLNKADQVDTQQLMRIYGALMWSLGKVMNTPEVMRVYIGSFDDKPVNDAVSRPLGNELFEKEQEDLLSDLKDIPKKACDRKINEFVKRARAAKIHAYIIGHLKKQMPVIIGKAKAQQMLIDNLEGEFAKVQREYHLPPGDFPNVGQFKDILSGHNIDKFVKLKPKMMQAVDDMLTHDIPNLLKTYRNSYTTPDLFNRSATTIKGGAATAVDRVLSRSSKTVCRSFTLFSASQKTQPFSTTLSHHFHSLVPQSPNKLIPIQVNLLNQPVSSSLTSRFGFSSSASPEPASDDPVKTSEEQPKVTDQNEQDKAAGQAKESDVESECDLSRDDLIKLLAEKEGLLKLKHKEIEKMQDKVLRTYAEMENVMDRTRREAVNSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIESPNDSAEAAQLLKTLLEGVEMTEKQLAEVLKKNGVEKFDPTNEPFDPHRHNAIFQLPDASKPPGTVGVVLKVGYMLYDRVLRPAEVGVTQEVEDNNAAE* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02721 808 Gene3D - 631 741 IPR013805 -
Rops11g02721 808 CDD EHD 143 387 - -
Rops11g02721 808 Gene3D Head domain of nucleotide exchange factor GrpE 743 798 IPR009012 GO:0006457
Rops11g02721 808 PRINTS GrpE protein signature 655 671 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops11g02721 808 PRINTS GrpE protein signature 751 766 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops11g02721 808 PRINTS GrpE protein signature 778 797 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops11g02721 808 Coils Coil 633 653 - -
Rops11g02721 808 Gene3D - 144 372 IPR027417 -
Rops11g02721 808 Hamap Protein GrpE [grpE]. 588 799 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops11g02721 808 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 138 374 IPR030381 GO:0005525
Rops11g02721 808 MobiDBLite consensus disorder prediction 57 94 - -
Rops11g02721 808 Gene3D - 108 480 - -
Rops11g02721 808 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 744 799 IPR009012 GO:0006457
Rops11g02721 808 MobiDBLite consensus disorder prediction 589 620 - -
Rops11g02721 808 FunFam GrpE protein homolog 627 742 - -
Rops11g02721 808 Pfam N-terminal EH-domain containing protein 107 139 IPR031692 -
Rops11g02721 808 ProSitePatterns grpE protein signature. 754 797 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops11g02721 808 MobiDBLite consensus disorder prediction 573 620 - -
Rops11g02721 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 405 IPR027417 -
Rops11g02721 808 MobiDBLite consensus disorder prediction 69 87 - -
Rops11g02721 808 CDD GrpE 648 797 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops11g02721 808 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 637 743 IPR013805 -
Rops11g02721 808 Pfam Dynamin family 144 303 IPR045063 -
Rops11g02721 808 Pfam GrpE 605 798 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Rops11g02721 808 PANTHER EH DOMAIN 68 670 - -
Rops11g02721 808 Pfam Domain of unknown function (DUF5600) 379 480 IPR040990 -
Rops11g02721 808 MobiDBLite consensus disorder prediction 573 587 - -
Rops11g02721 808 FunFam GrpE protein homolog 743 799 - -
Rops11g02721 808 Coils Coil 412 432 - -
Rops11g02721 808 FunFam EH domain-containing protein 1 144 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02721 Rops-Chr11 46849438 46870920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02721 101 488 EF-hand Containing Proteins AT3G20290 84.536 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02721 K12483 - egr:104450264 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02721 11 46849438 46870920 Rops11g02721 11 46849438 46870920 ECH