Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02690 ATGGCTTTCCCTTGTGTACTTGTTCTGCTAATTCTTCAGTATTCATTGATAGCATTGGTGTCTTCTTCTGGACCTGGAAATGGCTGGAAAACATTGCAAGGATCTCCACCACTAGTCATAGCGCGTGGTGGGTTTTCAGGGATATTTCCAGATTCAAGTTTACCTTCCTATACTTTGGCACTAAACACTAGTGGCCCAAATGTCACTCTATGGTGTGATGTGCAATTGACAAAGGATGGAGTTGGGATTTGTTTTCCAGAGCTCAAGCTGGACAATGCCACTGACATTACCATTGTTTACCCTGGCAAAGCAAAGGATTACTCAGTTGATGGGATTCCAACCCGGGGATGGTTATCTGTGGACTACAACTTCAATCAACTAGCAGATGTCTCCCTTGTTCAGGGAGTGTACTCTCGAACAAATATGTTTGATGGCGGTCACTATCACATTCTCAGTGTTGAAGATGTTGCCAAATTAGTAAAATCACCATCAACAGGCCTGTGGTTAAATGTTCAGCATGATACATTCTTCAAACAGCAGAATTTGAGTGTAGAAAATTTTCTACAGTCTCTTTCTACTAAAGGAGTATCTGCCAATTACATCTCATCACCTGATGTGAATTTCTTAAGAAGAGTAAGATCAAAATTCAGTCCAAGAAAAACCAGCCTGATTTTCAGGTTTCTAGACCAGAATAAGATTGAACCTGCAACCAAGCAAACTTATGGTGCACTCTTGAAAAATCTCAAGTTGATCAGGAAATTTGCTTCTGGGATTCTTGTTCCCAAGGGCTATATATGGCCTGTGGACTCAGACCTTTATCTCCAACCACATGCCTCTCTTGTCTCTGATGCTCATAAAGAAGGGCTTCATGTTTTTGTATCAGACCTTGTTAATGATGTTCCATTTAGCTACAATTTCAGTTTTGATCCTCTGGCTGAGTGCTTGTCTTTCATTGATGGTGGTACCTTCTCTGTTGATGGTGTGCTGTCAGACTTCCCAGTAACTCCATCTGCAGCCATAAATTGCTTTTCTGGCCTAGGGAAAAATGCCAAAAAACAAGTGGAGACTTTGGTTATCACAAAATATGGAGCAAGTGGAGACTATCCTGCTTGTACTGACCTTGCATATAAGCAAGCTAAATCAGACGGAGCAGATGTACTTGATTGCCCTGTTCAAATGTCCAAAGATGGAATACCCTTTTGCTTAAGCTCTATAGATCTTTTAGAGAGCACAACAGTTGCTAATACAACATTCAAAAACCGTGCAACAACTATTCCAGAGATCAAAAATGGCAGTGGCATATACACATTTAGCTTGACATGGAATGAGATAAAAACATTGAAACCCTCAATATTGAACCCTTATGAGAAATACAGACTGTTCCGGAATCCTAAATTCAAAAATCAAGGGAAACTTTTAACCTTGTCTGATTTTTTGTCCTTGACTAAAGGCTCTGGCATCTTGATCAGCATAGATAATGCTGCCTACCTTGCACAAAAGCAGGGATTAAGTGTGACCAGTGCAGTCCTTAATGCTTTAAAAAAAGCAGGTTATGATAAACCAAGATCACATAAAGTTATGATTCAATCAACTCATAGCTCTGTACTGAAGATATTCAAGGATAAATCAAAATATGAAAGGGTTTACAAGGTTGATGAGAAGATTGGTGGTGCTACTGACTCAGCTATTAAGGACATTAAAACATTTGCTGATTCTGTGGTTATAGAAAAGGAATCTGTTTTTCCTGAATCTTCAGCCTTTCTAGTTAACTCTACAAACATTGTGGCAAGGCTACAATCATTTAACCTCCCAGTTCATGTAGAAACTTTCAGCAATGAATTTGTATCTCAAGCATGGGACTACTACTCAGATGCGTTTGTTGAGATAAATTCATTTGTCATTGGAGCTAAGGTTAATGGCATCATCACTGACTTCCCTAAGACAGCTAATAGATACAGAAGGAACAAGTGTTTAAAGCAAGGAAACAAAGCACCTTATATGAGACCTGTTGAACCTGGCAAACTTTTAGAACAAGCGGCTAAGTCATACCTTCCACCACCTGCCCCTCCTCTCCCAGTCTTGAATGATAATAATGTAACAGAGGCACCTTTGCCTAGTGTTTCTGGAAAAGTTCCAATTCCCAGTGCAGTTCCTGGATTTAGAGCACCAGCTCCAGCCCCCACCACAGCATGA 2193 0.4017 MAFPCVLVLLILQYSLIALVSSSGPGNGWKTLQGSPPLVIARGGFSGIFPDSSLPSYTLALNTSGPNVTLWCDVQLTKDGVGICFPELKLDNATDITIVYPGKAKDYSVDGIPTRGWLSVDYNFNQLADVSLVQGVYSRTNMFDGGHYHILSVEDVAKLVKSPSTGLWLNVQHDTFFKQQNLSVENFLQSLSTKGVSANYISSPDVNFLRRVRSKFSPRKTSLIFRFLDQNKIEPATKQTYGALLKNLKLIRKFASGILVPKGYIWPVDSDLYLQPHASLVSDAHKEGLHVFVSDLVNDVPFSYNFSFDPLAECLSFIDGGTFSVDGVLSDFPVTPSAAINCFSGLGKNAKKQVETLVITKYGASGDYPACTDLAYKQAKSDGADVLDCPVQMSKDGIPFCLSSIDLLESTTVANTTFKNRATTIPEIKNGSGIYTFSLTWNEIKTLKPSILNPYEKYRLFRNPKFKNQGKLLTLSDFLSLTKGSGILISIDNAAYLAQKQGLSVTSAVLNALKKAGYDKPRSHKVMIQSTHSSVLKIFKDKSKYERVYKVDEKIGGATDSAIKDIKTFADSVVIEKESVFPESSAFLVNSTNIVARLQSFNLPVHVETFSNEFVSQAWDYYSDAFVEINSFVIGAKVNGIITDFPKTANRYRRNKCLKQGNKAPYMRPVEPGKLLEQAAKSYLPPPAPPLPVLNDNNVTEAPLPSVSGKVPIPSAVPGFRAPAPAPTTA* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02690 730 Pfam Glycerophosphoryl diester phosphodiesterase family 363 648 IPR030395 GO:0006629|GO:0008081
Rops11g02690 730 ProSiteProfiles GP-PDE domain profile. 356 653 IPR030395 GO:0006629|GO:0008081
Rops11g02690 730 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 35 339 - -
Rops11g02690 730 CDD GDPD_SHV3_repeat_2 357 652 - -
Rops11g02690 730 Gene3D Phosphatidylinositol (PI) phosphodiesterase 36 339 IPR017946 GO:0006629|GO:0008081
Rops11g02690 730 Gene3D Phosphatidylinositol (PI) phosphodiesterase 355 652 IPR017946 GO:0006629|GO:0008081
Rops11g02690 730 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 9 710 - -
Rops11g02690 730 SUPERFAMILY PLC-like phosphodiesterases 36 339 IPR017946 GO:0006629|GO:0008081
Rops11g02690 730 CDD GDPD_SHV3_repeat_1 37 339 - -
Rops11g02690 730 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 354 653 - -
Rops11g02690 730 ProSiteProfiles GP-PDE domain profile. 37 340 IPR030395 GO:0006629|GO:0008081
Rops11g02690 730 SUPERFAMILY PLC-like phosphodiesterases 357 653 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02690 Rops-Chr11 46378591 46384577 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02690 5 729 Receptor kinase-like Gene Family AT4G26690 55.205 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02690 - - gmx:100799882 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02690 11 46378591 46384577 Rops11g02690 11 46378591 46384577 ECH