Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02687 ATGCCAGAGAGAGAAGTTTGTAGTCATGTGAAAGAGCCTCGTCTTGTAACTAGGAAGTTCTTGGCAAGACCTCAGCCTGAAGGTGTTGGGGCTGTTGTTAGAAGAAGCATAGGAAGGTTTGAGCTCAAGTACTTTGATCCTTTTCTTGTCTTGGATGAATTCTCAGTTACTGCTCCTGCTGGTTTTCCTGATCACCCTCATAGAGGCTTTGAGACTGTCACATACATGTTGCAGGGAGCTGTAACGCATGAAGATTTTGAAGGACACAAGGGAACAATAGAAGCTGGTGACTTGCAATGGATGACTGCAGGGAGAGGGATAGTTCACTCAGAAATGTCTGTGGCTCAAGGAACCCAAAAGGGTCTGCAATTGTGGATCAACCTGGCTTCCAAATATAAAATGATTGAACCAAGGTATCAAGAAGTGTTGAGTAAGGACATACCAGAAGCTGTGGAAGATGGTATCAAGGTTAGAGTTATAGCTGGGGAAGCTCTTGGGATAAAGTCTCCAATCTACACAAGGACTCCAACCATGTTCTTGGACTTTTACCTCAAATCTGGAGCTTACTTACAACAACATATACCAAAACCTTGGAATGCTTTTGTCTATATCTTAGAAGGAGAGGGTATCTTTGGAAACCTGAAATCTCAACCTGCAAACTCTCACCATATGCTTCTCCTTGGTCCTGGGGATGGCTTAGAGGCATGGAACAAATCTTCTAAGCTTCTTAGGTTCATTTTGGTTGGAGCTGAACCTCTTGGGGAACCTATGGTGCAATTTGGACCCTTTGTGATGAACACTCAAGAAGAGATTGACCAAACTATTGATGATTTTGAGAACTTTGCTAATGGATTTGAGAAAGCAAGACATTGGAGATCTGAAAGCACAATATAG 894 0.4273 MPEREVCSHVKEPRLVTRKFLARPQPEGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMSVAQGTQKGLQLWINLASKYKMIEPRYQEVLSKDIPEAVEDGIKVRVIAGEALGIKSPIYTRTPTMFLDFYLKSGAYLQQHIPKPWNAFVYILEGEGIFGNLKSQPANSHHMLLLGPGDGLEAWNKSSKLLRFILVGAEPLGEPMVQFGPFVMNTQEEIDQTIDDFENFANGFEKARHWRSESTI* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02687 297 CDD cupin_pirin_C 176 252 - -
Rops11g02687 297 Gene3D Jelly Rolls 27 279 IPR014710 -
Rops11g02687 297 FunFam pirin 27 167 - -
Rops11g02687 297 CDD cupin_pirin_N 31 128 - -
Rops11g02687 297 PIRSF Pirin 12 292 IPR012093 -
Rops11g02687 297 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Rops11g02687 297 Pfam Pirin C-terminal cupin domain 180 283 IPR008778 -
Rops11g02687 297 Gene3D Jelly Rolls 148 253 IPR014710 -
Rops11g02687 297 PANTHER PIRIN-RELATED 4 295 IPR012093 -
Rops11g02687 297 Pfam Pirin 33 126 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02687 Rops-Chr11 46314515 46317810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02687 13 289 Calmodulin-binding Proteins AT3G59220 59.140 1.78e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02687 K06911 - gmx:100802484 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02687 11 46314515 46317810 Rops11g02687 11 46314515 46317810 ECH
Rops11g02687 11 46314515 46317810 Rops9g00277 9 3438559 3441373 PCT