Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02680 ATGGGATTCTCAGTGGCAGCTTCATTGTGTTCCAAGGTTATGCTGAGAAGTACTCATGAAACAAGAATCAAGTGCCAAGTATTCTGCAGAACAGAACAGAATACTAGCGTTGGTTTCAAGTTCCCAAAGCATAAGGCCATTCAAAGATCAATTTTTCTAAGCAAGCAAGAGTCAATTGAGTTGGATGAGAGAAAGAGCCCAAATGAGGTTAAAGAAGAGATCAAACAATGTTATGAACTCATAAACAGATTAGGTCGTGGAGCTTTGTATCTGGGTTCTTCAAGGATGGGCCCCGGCCATTCACATTATGTGCAAGCACAAGAGCTGGCTAAAGAGATAGCGAATCTTTTGGACTGCACTTCATGGTCAGGGGCTGGACCAGGGCTAATGGATGCTGTTACTCAAGGTGCTCTGCTGGCCGGAAAACCAGTTGGTGGATTCAAGATAGGAAAAGAAGCCGGGGAATGGACAGCATCCAACTTCCATCCGTATTTACCATCAGAAAATTACCTTACCTGCAGGTTTTTCTCTGCAAGGAAGCATGGGCTGGTTGATGCTGTAGTGAGGAACAATTCATTTGATAAGACTGCTGTTGTTGCCCTTCCTGGTGGGATTGGTACTCTAGATGAGATGTTTGAGATACTGGCATTAATTCAGCTAGAAAGAATTGGATCAAAGCTTCCTGTTCCCTTCCTGCTGATGAATTATGATTCATTTTATTCAAAGCTGCTTGAGTTCTTAAATGTTTGTGAGGATTGGGGAACTGTCTCTAAAGGAGAGGTTGCATCATTGTGGAAGGTTTGTGAAAGCAACTCAGAAGCTTTGGCTTACCTGGCAGATTTCTACTTCATTTCTTCCAGTGACACAAGTAATAATAATATTCTCATAAACTACTGCAATATTACCAAGCTTTATGACATGTGCAGTAGCAAGTGCTGA 939 0.4217 MGFSVAASLCSKVMLRSTHETRIKCQVFCRTEQNTSVGFKFPKHKAIQRSIFLSKQESIELDERKSPNEVKEEIKQCYELINRLGRGALYLGSSRMGPGHSHYVQAQELAKEIANLLDCTSWSGAGPGLMDAVTQGALLAGKPVGGFKIGKEAGEWTASNFHPYLPSENYLTCRFFSARKHGLVDAVVRNNSFDKTAVVALPGGIGTLDEMFEILALIQLERIGSKLPVPFLLMNYDSFYSKLLEFLNVCEDWGTVSKGEVASLWKVCESNSEALAYLADFYFISSSDTSNNNILINYCNITKLYDMCSSKC* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02680 312 PANTHER EXPRESSED PROTEIN 248 292 - -
Rops11g02680 312 Pfam Possible lysine decarboxylase 130 277 IPR031100 -
Rops11g02680 312 SUPERFAMILY MCP/YpsA-like 87 278 - -
Rops11g02680 312 Gene3D - 66 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02680 Rops-Chr11 46242639 46245761 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02680 - - gmx:100803538 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02680 11 46242639 46245761 Rops11g02680 11 46242639 46245761 ECH