Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02653 ATGGAAAGGGAGGTTGATTTGATCGTTGGTAATGCCAAGAAGACTTTGGAGGCATTGGGGTTTTTCCATTTGGTTTCTGCTTTTGGTTTGGTTTCTGAATTCAGCATGGATGAGCTTGTTGGTTTTTCGGTCTTTGCTGCGGTTAATGGCGAGTTTCCGGAGCTTTGCCGGGCCATTGGTTTGTGGGATAGATTTCCTGACAAGAAAATATTTTGCAAGAAAGATGATATTGTCCAGAAACTTAGAGAAAGGGGCAAACATATTCTGGCTGTCAAGTATGTTTTTAAGTTTAAACTTGCTGATAAGATTCCACCAGTTCCTGTTTTGAAAGCTTGTGTGGATGAATCTAAGAAACTTGTTGAAAGACTTTTCCAGGAAAGAAAGTTACTGATTGATACTACAGCTATTGAAATTGATGCACTGAAATCAGTAATTAAGATTATTGAGGATCGTCAGCTTGAATCTGAATATCCGTGA 477 0.3878 MEREVDLIVGNAKKTLEALGFFHLVSAFGLVSEFSMDELVGFSVFAAVNGEFPELCRAIGLWDRFPDKKIFCKKDDIVQKLRERGKHILAVKYVFKFKLADKIPPVPVLKACVDESKKLVERLFQERKLLIDTTAIEIDALKSVIKIIEDRQLESEYP* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02653 158 Pfam Frigida-like protein 12 158 IPR012474 -
Rops11g02653 158 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 11 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02653 Rops-Chr11 45385523 45389637 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02653 - - adu:107464496 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02653 11 45385523 45389637 Rops11g02653 11 45385523 45389637 ECH
Rops11g02653 11 45385523 45389637 Rops9g00269 9 3366372 3368953 PCT